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hypothetical_protein_H012_gp657

Euk-Vir

Acanthamoeba_polyphaga_moumouvirus

hypothetical_protein_H012_gp657__YP_007354244__Acanthamoeba_polyphaga_moumouvirus__1269028

Identity

Accession:
YP_007354244 ↗
Protein ID:
hypothetical_protein_H012_gp657
Kingdom:
euk

Quality

79.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Moumouvirus› Acanthamoeba_polyphaga_moumouvirus

TaxID: 1269028

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-146
PDB
Domain cluster: rep: hypothetical_protein_ml_189__YP_009165155__Mollivirus_sibericum_Viruses.__X__D55-144
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dwnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.62 51.0 5.03e-01 90.0% 86.6%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.62 49.0 4.11e-01 86.7% 67.5%
1dgnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.62 48.0 4.91e-01 87.8% 86.5%
3zssA02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 46.0 4.88e-01 85.6% 100.0%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.59 40.0 4.57e-01 71.1% 100.0%
3fhnA05 1.10.10.2270 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E 0.57 29.0 3.33e-01 84.4% 64.2%
2gfpA00 1.20.1720.10 Mainly Alpha › Up-down Bundle › Multidrug resistance protein D › Multidrug resistance protein D 0.56 45.0 3.08e-01 91.1% 31.7%
3ljcA02 1.20.58.1480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 40.0 3.67e-01 76.7% 65.1%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 37.0 3.60e-01 70.0% 60.0%
1v9vA01 1.20.1480.20 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like 0.56 40.0 3.95e-01 75.6% 95.8%
2cyaA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.56 45.0 4.13e-01 90.0% 79.7%
2yviA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 45.0 4.54e-01 91.1% 91.0%
1wxpA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 43.0 4.47e-01 86.7% 91.7%
2hkvA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.54 44.0 3.89e-01 92.2% 87.2%
1bxiA00 1.10.1200.20 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein 0.54 45.0 4.67e-01 91.1% 100.0%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.54 42.0 3.94e-01 88.9% 82.2%
3vygE00 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.53 33.0 2.84e-01 87.8% 37.1%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.53 36.0 3.65e-01 70.0% 78.9%
2v0cA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.53 39.0 3.26e-01 77.8% 54.7%
1vluA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 41.0 3.07e-01 87.8% 66.1%
1te2A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 35.0 3.87e-01 71.1% 90.3%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 41.0 3.65e-01 92.2% 88.4%
6bz0D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 33.0 2.55e-01 85.6% 26.5%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.51 36.0 3.50e-01 75.6% 83.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3315624 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 45.0 4.27e-01 76.7% 89.1%
3166133 101.1.2.103 ↗ alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 0.61 37.0 4.07e-01 95.6% 77.1%
5061573 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 49.0 3.69e-01 91.1% 52.4%
5009551 601.7.1.3 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PaREP1 0.59 47.0 4.26e-01 86.7% 88.0%
3549109 110.1.1.2 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD 0.59 47.0 4.69e-01 90.0% 84.2%
3895592 601.14.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.59 46.0 3.92e-01 87.8% 93.1%
3266296 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.58 41.0 3.55e-01 73.3% 90.7%
3031021 620.1.1.1 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF664 0.58 47.0 3.92e-01 92.2% 87.1%
3958180 620.1.1.0 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases 0.58 47.0 3.95e-01 92.2% 89.7%
3558099 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.58 37.0 3.92e-01 71.1% 73.8%
3588754 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.56 40.0 3.20e-01 76.7% 83.1%
3179598 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.56 38.0 4.20e-01 84.4% 96.9%
3469981 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 40.0 3.44e-01 76.7% 77.3%
3598386 606.1.1.0 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.55 40.0 3.58e-01 78.9% 86.7%
3259545 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.55 37.0 3.36e-01 70.0% 95.2%
3297644 101.1.1.148 ↗ alpha arrays › HTH › HTH › Three-helical HTH › EPL1 0.55 32.0 2.89e-01 95.6% 39.2%
3223251 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 40.0 3.39e-01 80.0% 87.3%
3868088 110.1.1.2 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD 0.54 45.0 4.52e-01 97.8% 93.3%
2033715 3804.1.1.1 ↗ alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › Cas13a_endoribonuclease 0.53 42.0 3.06e-01 87.8% 56.2%
4284025 206.1.2.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.52 41.0 3.05e-01 87.8% 91.0%
4378040 2011.1.1.5 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 0.51 42.0 3.23e-01 95.6% 82.0%
3262893 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 3.36e-01 81.1% 55.4%
D2 medium residues 1-52
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 50.0 4.84e-01 75.0% 95.0%
1ve3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 52.0 3.53e-01 88.5% 45.8%
1y8cA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 52.0 3.59e-01 88.5% 27.4%
1httA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.64 55.0 3.51e-01 100.0% 59.6%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.64 48.0 4.45e-01 82.7% 74.6%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 3.75e-01 78.8% 60.2%
4qclA03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 53.0 3.45e-01 100.0% 55.7%
6hxqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 50.0 3.86e-01 94.2% 82.9%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.59 33.0 3.24e-01 86.5% 48.3%
2pjrA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 3.91e-01 94.2% 82.1%
2yv7A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 45.0 3.47e-01 92.3% 80.4%
2uy1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 47.0 2.87e-01 98.1% 15.8%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 46.0 2.94e-01 100.0% 42.4%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 40.0 3.60e-01 78.8% 90.7%
3r0sA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.53 36.0 3.46e-01 71.2% 68.8%
2qbyA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.50 38.0 3.05e-01 82.7% 61.2%
4d9gA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 3.14e-01 90.4% 58.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3389639 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.77 61.0 4.71e-01 86.5% 40.0%
3993641 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 55.0 3.31e-01 82.7% 57.1%
5034128 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.70 55.0 5.35e-01 90.4% 93.3%
3706397 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 4.47e-01 78.8% 89.2%
4958724 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 46.0 3.78e-01 78.8% 57.1%
4625648 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 45.0 3.65e-01 78.8% 59.6%
5077445 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 41.0 3.08e-01 71.2% 43.8%
4978533 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 42.0 3.23e-01 73.1% 54.1%
5065203 316.1.1.18 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.62 47.0 3.04e-01 84.6% 37.8%
5011050 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 42.0 3.32e-01 75.0% 50.4%
4983405 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 44.0 3.20e-01 80.8% 44.2%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.70e-01 76.9% 68.2%
3915296 109.4.1.728 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 49.0 3.18e-01 90.4% 36.8%
4978424 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 42.0 3.28e-01 78.8% 65.8%
3587826 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 43.0 3.47e-01 82.7% 64.8%
4986510 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 42.0 3.11e-01 80.8% 40.7%
3830178 109.4.1.1127 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_Cnot1 0.57 44.0 2.53e-01 88.5% 11.5%
5046694 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 36.0 3.57e-01 75.0% 61.8%
3634549 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.55 38.0 3.20e-01 71.2% 66.7%
4268079 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.52 37.0 2.21e-01 82.7% 76.8%