←Back to structures
hypothetical_protein_HM89_gp105
Euk-VirPigeonpox_virus
hypothetical_protein_HM89_gp105__YP_009046335__Pigeonpox_virus__10264
Identity
- Accession:
- YP_009046335 ↗
- Protein ID:
- hypothetical_protein_HM89_gp105
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Pigeonpox_virus
TaxID: 10264
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 532-562_591-715
D2
medium
residues 4-128
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04497.19 best | Pox_E2-like | 110.8 | 1.00e-31 | 96.0% | 14.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h2uA01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 62.0 | 4.87e-01 | 96.0% | 82.1% |
| 3tt9A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.68 | 61.0 | 4.97e-01 | 98.4% | 95.3% |
| 3ut4A00 | 1.25.40.750 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 | 0.68 | 47.0 | 4.71e-01 | 71.2% | 100.0% |
| 4b89A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 57.0 | 4.68e-01 | 96.8% | 85.7% |
| 1n69B00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.62 | 25.0 | 3.05e-01 | 79.2% | 56.2% |
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 49.0 | 4.37e-01 | 99.2% | 86.3% |
| 7tj4A01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 40.0 | 4.11e-01 | 77.6% | 91.7% |
| 1dvpA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 4.34e-01 | 93.6% | 99.3% |
| 6n2aB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 44.0 | 3.68e-01 | 94.4% | 77.3% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 44.0 | 3.60e-01 | 95.2% | 60.4% |
| 5gjnA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.50 | 43.0 | 3.59e-01 | 95.2% | 59.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3713379 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.69 | 62.0 | 4.60e-01 | 100.0% | 55.9% |
| 3358502 | 109.4.1.1495 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 | 0.67 | 50.0 | 4.48e-01 | 78.4% | 95.0% |
| 3214837 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 60.0 | 4.81e-01 | 100.0% | 70.6% |
| 3773429 | 109.4.1.886 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOCK | 0.64 | 56.0 | 4.24e-01 | 100.0% | 87.5% |
| 3580037 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.63 | 47.0 | 4.72e-01 | 79.2% | 89.2% |
| 3657261 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 55.0 | 3.94e-01 | 99.2% | 44.7% |
| 3377393 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 48.0 | 4.58e-01 | 82.4% | 96.7% |
| 4033156 | 109.4.1.3421 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30153 | 0.62 | 55.0 | 4.00e-01 | 99.2% | 48.8% |
| 3421745 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.62 | 54.0 | 4.35e-01 | 96.0% | 73.5% |
| 3837456 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.61 | 55.0 | 4.61e-01 | 99.2% | 61.9% |
| 3724032 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.61 | 54.0 | 4.60e-01 | 98.4% | 72.7% |
| 3823526 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.60 | 50.0 | 3.94e-01 | 93.6% | 74.7% |
| 3627265 | 109.4.1.1807 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26573, PF30504 | 0.59 | 52.0 | 3.78e-01 | 100.0% | 68.2% |
| 3394687 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 42.0 | 4.04e-01 | 74.4% | 87.6% |
| 3698455 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.58 | 52.0 | 3.73e-01 | 98.4% | 49.2% |
| 3360812 | 109.4.1.1520 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, E_motif | 0.58 | 49.0 | 3.52e-01 | 93.6% | 47.2% |
| 3675880 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.57 | 43.0 | 4.32e-01 | 79.2% | 99.2% |
| 3268845 | 109.4.1.2014 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, TPR_14 | 0.57 | 41.0 | 4.17e-01 | 74.4% | 100.0% |
| 3348781 | 109.4.1.1296 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long, TPR_24 | 0.56 | 50.0 | 4.07e-01 | 100.0% | 83.3% |
| 3368213 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.54 | 47.0 | 3.95e-01 | 99.2% | 69.6% |
| 3306628 | 3599.1.1.1 ↗ | alpha superhelices › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › MCD_N | 0.53 | 39.0 | 3.77e-01 | 76.0% | 92.9% |
| 3609877 | 109.4.1.921 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IF140-IFT172 | 0.53 | 45.0 | 2.89e-01 | 94.4% | 24.5% |
| 3554392 | 109.4.1.1148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NUP160_120_M | 0.52 | 45.0 | 4.15e-01 | 100.0% | 100.0% |
D3
medium
residues 353-439
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04497.19 best | Pox_E2-like | 117.0 | 1.40e-33 | 100.0% | 12.0% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gmkZ01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 62.0 | 4.56e-01 | 96.6% | 86.2% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 60.0 | 4.23e-01 | 95.4% | 73.3% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 61.0 | 5.30e-01 | 100.0% | 94.9% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.66 | 54.0 | 4.96e-01 | 90.8% | 99.1% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.65 | 56.0 | 4.41e-01 | 98.9% | 59.5% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 57.0 | 4.18e-01 | 100.0% | 51.2% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.64 | 56.0 | 4.86e-01 | 100.0% | 96.4% |
| 4ie5A02 | 1.20.58.1470 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain | 0.61 | 44.0 | 3.85e-01 | 77.0% | 86.6% |
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.60 | 43.0 | 4.34e-01 | 73.6% | 97.6% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 43.0 | 4.06e-01 | 78.2% | 92.9% |
| 1n2aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 43.0 | 4.07e-01 | 77.0% | 94.3% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 42.0 | 3.98e-01 | 75.9% | 93.4% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 43.0 | 3.97e-01 | 78.2% | 92.9% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 44.0 | 4.09e-01 | 82.8% | 93.1% |
| 3emuA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 50.0 | 4.30e-01 | 100.0% | 80.6% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 3.94e-01 | 79.3% | 92.4% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.55 | 40.0 | 3.36e-01 | 79.3% | 96.3% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 39.0 | 4.27e-01 | 87.4% | 94.4% |
| 1z45A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.51 | 31.0 | 3.53e-01 | 70.1% | 82.5% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 38.0 | 2.95e-01 | 80.5% | 73.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2029562 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 58.0 | 4.46e-01 | 92.0% | 56.3% |
| 3177234 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.66 | 57.0 | 3.47e-01 | 100.0% | 22.0% |
| 3728888 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.64 | 56.0 | 4.21e-01 | 100.0% | 41.7% |
| 3996096 | 109.4.1.590 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1 | 0.64 | 56.0 | 4.10e-01 | 100.0% | 47.8% |
| 3318819 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 53.0 | 4.34e-01 | 98.9% | 54.9% |
| 4029016 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.62 | 51.0 | 3.77e-01 | 95.4% | 51.2% |
| 3642758 | 109.4.1.1277 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 | 0.62 | 49.0 | 4.08e-01 | 88.5% | 73.1% |
| 3696650 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 3.40e-01 | 100.0% | 55.6% |
| 3311440 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.61 | 53.0 | 4.08e-01 | 100.0% | 57.6% |
| 3691784 | 611.3.1.6 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › BLM10_N | 0.60 | 43.0 | 4.20e-01 | 75.9% | 83.2% |
| 3816589 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.58 | 51.0 | 3.32e-01 | 100.0% | 24.7% |
| 4554985 | 3322.1.1.0 ↗ | alpha bundles › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta | 0.58 | 43.0 | 3.86e-01 | 81.6% | 74.6% |
| 3370036 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.57 | 49.0 | 4.13e-01 | 100.0% | 63.1% |
| 3300277 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.56 | 48.0 | 3.87e-01 | 100.0% | 47.9% |
| 3208330 | 226.1.1.29 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › PF30957 | 0.56 | 46.0 | 3.65e-01 | 94.3% | 57.5% |