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hypothetical_protein_HhV6Bgp020

Euk-Vir

Human_betaherpesvirus_6B

hypothetical_protein_HhV6Bgp020__NP_050195__Human_betaherpesvirus_6B__32604

Identity

Accession:: NP_050195 ↗
Protein ID:: hypothetical_protein_HhV6Bgp020
Kingdom:: euk

Quality

59.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Human_betaherpesvirus_6B

TaxID: 32604

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 103-254

PDB

Domain cluster: rep: tegument_protein_UL25__YP_004940051__Aotine_betaherpesvirus_1__50290__D247-382

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04637.17 best	Herpes_pp85	278.9	9.60e-83	100.0%	28.6%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4k1pE00	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.59	54.0	4.23e-01	100.0%	76.9%
2kmfA01	1.20.58.810	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27	0.58	31.0	3.69e-01	82.2%	75.5%
2hfiA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.54	33.0	3.59e-01	86.8%	74.0%
3k2kA02	3.40.630.10	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases	0.54	40.0	3.36e-01	77.6%	96.2%
2hujA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.52	32.0	3.46e-01	81.6%	72.0%
1sziA02	1.20.120.340	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS	0.52	31.0	3.29e-01	81.6%	65.0%
3v53E00	1.20.1390.10	Mainly Alpha › Up-down Bundle › PWI domain › PWI domain	0.52	32.0	3.73e-01	75.0%	89.2%
5nx5B00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	46.0	3.72e-01	100.0%	98.3%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1828346	1063.1.1.1 ↗	alpha complex topology › Tegument protein U14 › Tegument protein U14 › Tegument protein U14 › Herpes_pp85	0.96	93.0	6.35e-01	100.0%	33.9%
4836806	1063.1.1.1 ↗	alpha complex topology › Tegument protein U14 › Tegument protein U14 › Tegument protein U14 › Herpes_pp85	0.88	84.0	5.93e-01	100.0%	37.7%
3482748	5057.1.1.0 ↗	alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore	0.64	35.0	3.21e-01	83.6%	42.1%
3633774	5051.1.1.9 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur	0.56	51.0	3.59e-01	100.0%	66.9%
4620700	5050.1.1.81 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › TerC	0.55	44.0	3.75e-01	84.9%	78.8%
3371913	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.54	44.0	3.66e-01	87.5%	89.6%
4984136	5051.1.1.0 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like	0.53	48.0	3.40e-01	100.0%	66.3%
3229440	5050.1.1.4 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran	0.51	38.0	3.64e-01	100.0%	65.6%
3403640	3890.1.1.1 ↗	alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I	0.51	40.0	3.57e-01	81.6%	70.2%
3866777	5001.1.1.3 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2	0.51	41.0	3.15e-01	85.5%	83.8%

D2 medium residues 17-102

PDB

Domain cluster: rep: tegument_protein_UL25__YP_004940051__Aotine_betaherpesvirus_1__50290__D159-246

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04637.17 best	Herpes_pp85	147.7	5.50e-43	97.7%	15.5%

D3 medium residues 260-354_397-414_431-462

PDB