←Back to structures

hypothetical_protein_HhV6Bgp062

Euk-Vir

Human_betaherpesvirus_6B

hypothetical_protein_HhV6Bgp062__NP_050236__Human_betaherpesvirus_6B__32604

Identity

Accession:
NP_050236 ↗
Protein ID:
hypothetical_protein_HhV6Bgp062
Kingdom:
euk

Quality

63.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Human_betaherpesvirus_6B

TaxID: 32604

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-148
PDB
D2 high residues 153-321
PDB
D3 high residues 325-460
PDB
Domain cluster: rep: ORF10__YP_009173888__Felis_catus_gammaherpesvirus_1__1452540__D280-429
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06501.16 best Herpes_U55 221.9 2.00e-65 100.0% 31.5%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h6xB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.82 57.0 5.84e-01 70.6% 86.2%
1dunA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.80 55.0 5.89e-01 70.6% 85.0%
3zf0A00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.78 54.0 5.26e-01 70.6% 85.9%
1sixA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.78 54.0 5.20e-01 70.6% 71.2%
1euwA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.77 53.0 5.39e-01 70.6% 80.9%
2bsyA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.69 60.0 5.89e-01 100.0% 85.7%
2ylkA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.64 46.0 4.52e-01 100.0% 69.7%
6tqdC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 40.0 4.58e-01 94.9% 88.5%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 36.0 3.83e-01 100.0% 63.3%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 38.0 4.59e-01 100.0% 96.6%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 36.0 4.26e-01 97.8% 87.6%
4zrxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 38.0 4.17e-01 100.0% 79.0%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 41.0 4.53e-01 100.0% 87.2%
1yllA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 31.0 3.65e-01 100.0% 70.7%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.29e-01 100.0% 77.9%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.58 38.0 3.91e-01 100.0% 69.8%
5mybA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 36.0 4.10e-01 95.6% 87.5%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 44.0 4.49e-01 100.0% 83.0%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 35.0 3.94e-01 93.4% 83.7%
4xvhA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 37.0 4.08e-01 100.0% 84.1%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 34.0 3.76e-01 99.3% 77.8%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.55 35.0 3.85e-01 100.0% 81.1%
1zx5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 32.0 3.97e-01 99.3% 95.2%
4fcaA01 2.60.120.1250 Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 0.55 37.0 4.08e-01 100.0% 86.2%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 3.56e-01 100.0% 55.2%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 33.0 3.78e-01 99.3% 81.4%
2ozjA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 33.0 3.66e-01 99.3% 77.1%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 4.08e-01 98.5% 89.1%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 4.22e-01 94.9% 92.8%
7bysA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 41.0 4.35e-01 100.0% 91.8%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 42.0 4.40e-01 100.0% 91.3%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 33.0 3.80e-01 98.5% 85.0%
3bb6C00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 32.0 3.46e-01 100.0% 71.4%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 33.0 3.68e-01 100.0% 79.4%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 33.0 3.64e-01 100.0% 77.5%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 35.0 3.81e-01 100.0% 81.6%
4e2gC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 32.0 3.32e-01 100.0% 65.9%
1yhfA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 33.0 3.62e-01 98.5% 79.1%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 34.0 3.74e-01 100.0% 81.6%
1w9sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 4.10e-01 100.0% 85.1%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 4.21e-01 100.0% 87.0%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.51 34.0 3.64e-01 100.0% 79.1%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 36.0 3.81e-01 97.1% 83.3%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
162469 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.79 55.0 5.94e-01 70.6% 92.1%
4997594 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.78 54.0 5.07e-01 70.6% 82.3%
4876557 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.78 54.0 5.37e-01 70.6% 77.1%
27204 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.77 54.0 5.44e-01 71.3% 81.3%
4656379 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.76 53.0 5.37e-01 70.6% 78.5%
3602611 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.76 52.0 5.02e-01 70.6% 85.2%
3242079 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 46.0 5.13e-01 100.0% 83.8%
1247195 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.69 59.0 5.94e-01 93.4% 90.4%
4014484 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 39.0 4.40e-01 100.0% 77.0%
5007680 70.2.1.6 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DUF22 0.66 45.0 4.73e-01 95.6% 76.0%
4969939 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 38.0 4.38e-01 94.9% 80.0%
4929792 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 40.0 4.54e-01 100.0% 83.0%
5026423 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 38.0 4.25e-01 100.0% 74.3%
3231575 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 38.0 4.15e-01 93.4% 70.9%
4025604 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.63 39.0 4.22e-01 100.0% 73.6%
3967117 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 38.0 4.54e-01 100.0% 90.0%
5042218 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 38.0 4.38e-01 100.0% 84.2%
3946137 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 34.0 4.22e-01 95.6% 87.5%
5005659 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 50.0 5.25e-01 91.2% 92.8%
4982968 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 36.0 4.38e-01 89.7% 90.6%
3259180 10.4.1.25 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF26736 0.62 35.0 4.22e-01 100.0% 88.0%
4382620 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 38.0 4.32e-01 100.0% 85.3%
3713297 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 38.0 4.21e-01 100.0% 78.1%
3686437 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 38.0 4.21e-01 100.0% 78.1%
2455591 11.1.5.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.61 37.0 4.34e-01 100.0% 87.1%
3783891 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.61 38.0 4.04e-01 100.0% 71.3%
3925162 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.61 41.0 4.47e-01 100.0% 84.5%
5008219 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 39.0 4.47e-01 97.8% 90.0%
3718531 11.1.1.360 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig 0.60 40.0 2.87e-01 95.6% 23.0%
5014947 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 5.01e-01 95.6% 84.0%
5039382 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 35.0 4.15e-01 100.0% 90.6%
4028847 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.59 36.0 4.08e-01 99.3% 81.0%
3886818 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.59 36.0 3.05e-01 94.9% 35.2%
5045474 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 33.0 3.61e-01 95.6% 66.1%
2611886 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 34.0 4.12e-01 86.8% 88.9%
5046040 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 39.0 4.34e-01 100.0% 89.5%
4256361 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 48.0 4.08e-01 93.4% 86.5%
5063640 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 33.0 3.85e-01 100.0% 84.4%
3231883 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 39.0 4.30e-01 100.0% 92.4%
3916306 10.32.1.179 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_C 0.54 38.0 4.25e-01 95.6% 94.3%
5009706 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 34.0 3.56e-01 100.0% 68.0%
3791166 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 38.0 3.95e-01 100.0% 79.8%
4977180 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 35.0 4.05e-01 100.0% 91.0%
4958065 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 33.0 3.73e-01 100.0% 82.0%
5026281 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 35.0 3.87e-01 100.0% 81.8%
3919527 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 38.0 4.27e-01 95.6% 97.1%
3593205 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.53 33.0 3.87e-01 100.0% 89.5%
3781908 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 42.0 4.28e-01 100.0% 86.9%
4880519 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 33.0 3.51e-01 100.0% 70.9%
4990903 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 32.0 3.62e-01 100.0% 78.8%
163801 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 33.0 3.64e-01 99.3% 77.3%
4003309 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 36.0 4.19e-01 97.1% 100.0%
4283552 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 47.0 3.48e-01 97.1% 76.2%
5063647 10.12.1.34 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › GPI 0.52 47.0 3.95e-01 99.3% 73.6%
2010380 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 32.0 3.68e-01 100.0% 83.8%
5034124 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 33.0 3.52e-01 100.0% 73.0%
3386919 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 32.0 3.52e-01 100.0% 75.5%
5026683 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 36.0 3.78e-01 100.0% 80.0%
1305 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 33.0 3.59e-01 98.5% 77.7%
164075 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 32.0 3.45e-01 100.0% 74.1%
1030916 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.51 33.0 3.71e-01 100.0% 85.6%
1180018 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 34.0 3.46e-01 100.0% 68.9%
4988382 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 34.0 3.70e-01 100.0% 82.3%
4590825 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.50 33.0 3.45e-01 100.0% 70.8%