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hypothetical_protein_KM509_gp028
Euk-VirShrimp_hemocyte_iridescent_virus
hypothetical_protein_KM509_gp028__YP_010084780__Shrimp_hemocyte_iridescent_virus__2039780
Identity
- Accession:
- YP_010084780 ↗
- Protein ID:
- hypothetical_protein_KM509_gp028
- Kingdom:
- euk
Quality
67.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Shrimp_hemocyte_iridescent_virus
TaxID: 2039780
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-117
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oduB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 44.0 | 3.08e-01 | 91.9% | 87.4% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.51 | 35.0 | 3.35e-01 | 70.9% | 77.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4882574 | 375.1.1.35 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP | 0.54 | 34.0 | 4.04e-01 | 74.4% | 96.6% |
| 3273844 | 109.4.1.1299 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Drf_FH3, Drf_GBD, FH3_FHOD1-3 | 0.53 | 46.0 | 3.35e-01 | 98.8% | 63.6% |
| 3909510 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 36.0 | 2.42e-01 | 72.1% | 79.7% |
| 4141631 | 7089.1.1.4 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › FlgI | 0.52 | 35.0 | 3.61e-01 | 77.9% | 74.7% |
| 3489390 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 40.0 | 4.12e-01 | 86.0% | 97.5% |
| 4636242 | 101.35.1.37 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › FlgI | 0.51 | 35.0 | 3.63e-01 | 76.7% | 77.9% |