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hypothetical_protein_KM509_gp059

Euk-Vir

Shrimp_hemocyte_iridescent_virus

hypothetical_protein_KM509_gp059__YP_010084811__Shrimp_hemocyte_iridescent_virus__2039780

Identity

Accession:: YP_010084811 ↗
Protein ID:: hypothetical_protein_KM509_gp059
Kingdom:: euk

Quality

64.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Decapodiridovirus› Shrimp_hemocyte_iridescent_virus

TaxID: 2039780

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-51_65-173

PDB

Domain cluster: rep: hypothetical_protein_ATL82_gp079__YP_009182078__Epizootic_haematopoietic_necrosis_virus__100217__D38-135

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19074.6 best	DUF5770	34.2	3.50e-08	93.5%	72.7%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fjqA01	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.55	44.0	3.24e-01	87.1%	89.1%
2f2gA00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.54	46.0	3.87e-01	95.2%	92.6%
2mgxA00	1.20.940.10	Mainly Alpha › Up-down Bundle › RNA Binding Protein, Prp18; Chain A › Functional domain of the splicing factor Prp18	0.53	36.0	3.62e-01	80.6%	66.4%
4hd1A00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	38.0	3.03e-01	78.2%	66.9%
2ppqA02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.51	41.0	3.48e-01	87.9%	79.4%
2k19A00	1.20.1440.140	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.51	36.0	3.97e-01	80.6%	93.9%
5bn3A04	1.10.1140.10	Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3	0.50	39.0	3.78e-01	86.3%	73.4%
2lseA00	1.20.120.1360	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.50	36.0	3.94e-01	75.8%	92.1%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3639254	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.68	40.0	4.77e-01	79.8%	85.9%
3759368	544.1.1.4 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › PF28319	0.57	39.0	4.16e-01	81.5%	81.0%
3547500	5001.1.1.19 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Tmemb_40	0.56	44.0	3.44e-01	83.9%	73.0%
4027044	4192.1.1.0 ↗	alpha bundles › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain	0.53	36.0	4.00e-01	80.6%	88.4%
1145735	544.1.1.2 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › SRA1	0.53	36.0	3.62e-01	80.6%	66.4%
3957182	5067.1.1.0 ↗	alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain	0.53	39.0	3.34e-01	77.4%	75.0%
3265711	5038.2.1.1 ↗	alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG	0.51	41.0	3.87e-01	86.3%	88.6%
3276195	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.50	38.0	3.01e-01	79.8%	88.8%