←Back to structures
hypothetical_protein_KM509_gp060
Euk-VirShrimp_hemocyte_iridescent_virus
hypothetical_protein_KM509_gp060__YP_010084812__Shrimp_hemocyte_iridescent_virus__2039780
Identity
- Accession:
- YP_010084812 ↗
- Protein ID:
- hypothetical_protein_KM509_gp060
- Kingdom:
- euk
Quality
46.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Shrimp_hemocyte_iridescent_virus
TaxID: 2039780
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 226-348
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ocsB01 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 41.0 | 3.73e-01 | 80.5% | 86.1% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 48.0 | 4.26e-01 | 100.0% | 92.1% |
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.52 | 39.0 | 3.94e-01 | 92.7% | 78.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400457 | 109.4.1.839 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT | 0.54 | 41.0 | 3.85e-01 | 88.6% | 63.9% |
| 3701254 | 109.30.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nic96 | 0.52 | 46.0 | 3.34e-01 | 100.0% | 55.6% |
| 3515056 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 3.19e-01 | 71.5% | 58.9% |
| 4944848 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.51 | 39.0 | 3.25e-01 | 82.9% | 65.8% |
| 5043155 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.50 | 41.0 | 4.11e-01 | 86.2% | 88.8% |
| 3616752 | 109.4.1.2468 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC8, TPR_7, TPR_8, TPR_16 | 0.50 | 43.0 | 2.88e-01 | 99.2% | 52.5% |