←Back to structures
hypothetical_protein_KM509_gp163
Euk-VirShrimp_hemocyte_iridescent_virus
hypothetical_protein_KM509_gp163__YP_010084915__Shrimp_hemocyte_iridescent_virus__2039780
Identity
- Accession:
- YP_010084915 ↗
- Protein ID:
- hypothetical_protein_KM509_gp163
- Kingdom:
- euk
Quality
47.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Shrimp_hemocyte_iridescent_virus
TaxID: 2039780
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-79
D2
medium
residues 174-266
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1he8A03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.66 | 48.0 | 4.59e-01 | 89.2% | 64.9% |
| 1ymgA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.64 | 48.0 | 3.65e-01 | 81.7% | 82.0% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.62 | 54.0 | 4.49e-01 | 95.7% | 98.8% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.60 | 51.0 | 4.26e-01 | 95.7% | 87.5% |
| 2vxgA02 | 1.10.220.100 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 | 0.59 | 47.0 | 4.90e-01 | 86.0% | 100.0% |
| 2ggfA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 50.0 | 4.47e-01 | 100.0% | 69.3% |
| 1yz5B00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.57 | 49.0 | 3.81e-01 | 100.0% | 45.0% |
| 3ubkB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 48.0 | 4.43e-01 | 98.9% | 81.6% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 46.0 | 4.43e-01 | 91.4% | 94.3% |
| 3wirA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.56 | 49.0 | 3.27e-01 | 100.0% | 28.2% |
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 47.0 | 4.33e-01 | 96.8% | 94.4% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 45.0 | 4.22e-01 | 97.8% | 90.2% |
| 2c12A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 40.0 | 3.72e-01 | 81.7% | 74.8% |
| 2wviA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 41.0 | 3.54e-01 | 97.8% | 50.0% |
| 3c02A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 44.0 | 3.37e-01 | 100.0% | 81.4% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.50 | 38.0 | 3.94e-01 | 82.8% | 92.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3252200 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.63 | 55.0 | 4.64e-01 | 96.8% | 96.2% |
| 3607465 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.63 | 55.0 | 4.29e-01 | 98.9% | 81.0% |
| 3706015 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.61 | 52.0 | 4.04e-01 | 96.8% | 87.9% |
| 3676370 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 52.0 | 3.56e-01 | 95.7% | 44.1% |
| 3735775 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 53.0 | 4.01e-01 | 100.0% | 58.7% |
| 5016390 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 50.0 | 4.09e-01 | 95.7% | 58.3% |
| 3185303 | 109.4.1.1378 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428, TPR_Trm732_C | 0.59 | 50.0 | 3.07e-01 | 97.8% | 30.9% |
| 4166627 | 109.4.1.1681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TMEM232 | 0.58 | 51.0 | 4.14e-01 | 98.9% | 57.8% |
| 2713874 | 5048.1.1.2 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › Form_Nir_trans | 0.56 | 49.0 | 3.51e-01 | 100.0% | 67.7% |
| 5000552 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 46.0 | 4.58e-01 | 97.8% | 99.0% |
| 3921848 | 192.29.1.28 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PIGO_PIGG | 0.54 | 45.0 | 3.32e-01 | 98.9% | 73.3% |
| 3283936 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.51 | 40.0 | 3.53e-01 | 86.0% | 75.9% |
D3
medium
residues 267-325
D4
medium
residues 356-496