←Back to structures

hypothetical_protein_KM542_gp064

Euk-Vir

Akhmeta_virus

hypothetical_protein_KM542_gp064__YP_010085512__Akhmeta_virus__2200830

Identity

Accession:: YP_010085512 ↗
Protein ID:: hypothetical_protein_KM542_gp064
Kingdom:: euk

Quality

88.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Orthopoxvirus_akhmetapox

TaxID: 2200830

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 545-735

PDB

Domain cluster: rep: MC042L__NP_043993__Molluscum_contagiosum_virus_subtype_1__10280__D591-783

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	218.3	3.20e-64	92.7%	24.8%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3dd7C00	1.20.120.1870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain	0.55	34.0	4.16e-01	94.8%	96.7%
2vm6A00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.51	28.0	3.24e-01	78.0%	70.1%
4m5bA00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.50	39.0	3.80e-01	92.1%	72.4%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4971986	3651.1.1.1 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B	0.57	34.0	4.25e-01	93.2%	99.1%
2808456	3651.1.1.1 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B	0.56	33.0	4.15e-01	90.1%	98.1%
3230224	708.1.1.0 ↗	beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain	0.54	43.0	4.57e-01	83.8%	94.6%
5052086	601.7.1.2 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN	0.52	35.0	4.11e-01	93.7%	99.2%

D2 medium residues 41-109

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	94.1	1.10e-26	100.0%	9.7%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tt9A00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.73	63.0	4.42e-01	100.0%	62.7%
3sbtB02	1.25.40.550	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Aar2, C-terminal domain-like	0.61	47.0	3.75e-01	88.4%	64.3%
3busB00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.55	43.0	3.03e-01	88.4%	32.2%
1v9mA01	1.10.132.50	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › ATP synthase (C/AC39) subunit, domain 3	0.51	35.0	3.02e-01	72.5%	62.6%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3598764	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.64	54.0	3.92e-01	100.0%	51.6%
4606371	4995.1.1.1 ↗	alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2	0.54	38.0	3.73e-01	75.4%	93.3%

D3 medium residues 110-176

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	63.9	1.60e-17	100.0%	9.2%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4c9bB00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.66	57.0	3.85e-01	100.0%	71.5%
3tp3A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.63	46.0	3.66e-01	79.1%	78.4%
4gzrC00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.52	33.0	3.46e-01	85.1%	70.5%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3581503	109.4.1.1401 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_RPAP1	0.60	50.0	3.27e-01	100.0%	47.0%
3169908	109.4.1.167 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rif1_N	0.57	48.0	2.87e-01	100.0%	22.6%
3286211	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.53	29.0	3.10e-01	83.6%	60.0%
4937022	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.52	35.0	3.63e-01	100.0%	75.0%
3852486	174.1.1.43 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20	0.52	35.0	2.82e-01	70.1%	59.3%

D4 medium residues 177-246

PDB

Domain cluster: rep: putative_E2L_protein__YP_010085727__Orthopoxvirus_Abatino__2478919__D192-263

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	80.0	2.10e-22	100.0%	9.7%

D5 medium residues 376-470

PDB

Domain cluster: rep: hypothetical_protein_SB87_gp017__YP_009112758__Parapoxvirus_red_deer_HL953__1579460__D390-463

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	135.1	4.40e-39	100.0%	13.3%

D6 medium residues 471-544

PDB

Domain cluster: rep: MC032L__NP_043983__Molluscum_contagiosum_virus_subtype_1__10280__D481-554

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	39.8	3.10e-10	100.0%	9.4%