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hypothetical_protein_KM620_gp066

Euk-Vir

Hyposidra_talaca_nucleopolyhedrovirus

hypothetical_protein_KM620_gp066__YP_010086333__Hyposidra_talaca_nucleopolyhedrovirus__1070315

Identity

Accession:
YP_010086333 ↗
Protein ID:
hypothetical_protein_KM620_gp066
Kingdom:
euk

Quality

85.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-54
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06648.18 best AcMNPV_Ac75 35.9 1.10e-08 88.9% 39.8%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6lumD01 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.81 56.0 4.17e-01 72.2% 32.0%
3p01A01 6.10.140.590 Special › Helix non-globular › Helix Hairpins › 0.73 54.0 4.73e-01 88.9% 53.0%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 52.0 4.24e-01 85.2% 42.9%
4g3vA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.65 55.0 3.91e-01 94.4% 87.7%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.65 46.0 4.21e-01 77.8% 55.8%
2glzA00 3.30.1330.130 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.62 45.0 3.35e-01 79.6% 28.2%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.59 46.0 3.26e-01 88.9% 47.2%
7z7vE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.54 39.0 3.80e-01 88.9% 70.0%
2jfrA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.52 42.0 2.90e-01 100.0% 62.4%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027475 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.68 49.0 4.18e-01 88.9% 48.2%
3254185 206.1.1.66 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CLU 0.67 60.0 3.93e-01 100.0% 90.2%
4467403 4990.1.1.1 alpha arrays › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase_chap 0.65 51.0 3.23e-01 94.4% 16.7%
3441728 1008.1.1.0 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain 0.64 45.0 3.74e-01 79.6% 40.0%
4026181 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.63 54.0 4.44e-01 98.1% 73.0%
3855880 622.4.1.19 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 0.62 49.0 4.01e-01 88.9% 74.3%
3934503 614.1.1.1 alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 0.57 39.0 4.09e-01 74.1% 84.0%
3382585 109.4.1.1166 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MED33_TPR-like_mid 0.54 44.0 3.16e-01 98.1% 85.1%
3564291 101.1.1.66 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 0.52 46.0 3.99e-01 100.0% 69.4%
D2 medium residues 55-126
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06648.18 best AcMNPV_Ac75 81.4 8.80e-23 100.0% 58.5%