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hypothetical_protein_KM620_gp066
Euk-VirHyposidra_talaca_nucleopolyhedrovirus
hypothetical_protein_KM620_gp066__YP_010086333__Hyposidra_talaca_nucleopolyhedrovirus__1070315
Identity
- Accession:
- YP_010086333 ↗
- Protein ID:
- hypothetical_protein_KM620_gp066
- Kingdom:
- euk
Quality
85.3
mean pLDDT
Taxonomy
TaxID: 1070315
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06648.18 best | AcMNPV_Ac75 | 35.9 | 1.10e-08 | 88.9% | 39.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.81 | 56.0 | 4.17e-01 | 72.2% | 32.0% |
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 54.0 | 4.73e-01 | 88.9% | 53.0% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 52.0 | 4.24e-01 | 85.2% | 42.9% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 55.0 | 3.91e-01 | 94.4% | 87.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.65 | 46.0 | 4.21e-01 | 77.8% | 55.8% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.62 | 45.0 | 3.35e-01 | 79.6% | 28.2% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.59 | 46.0 | 3.26e-01 | 88.9% | 47.2% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.54 | 39.0 | 3.80e-01 | 88.9% | 70.0% |
| 2jfrA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 42.0 | 2.90e-01 | 100.0% | 62.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027475 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 49.0 | 4.18e-01 | 88.9% | 48.2% |
| 3254185 | 206.1.1.66 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CLU | 0.67 | 60.0 | 3.93e-01 | 100.0% | 90.2% |
| 4467403 | 4990.1.1.1 ↗ | alpha arrays › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase_chap | 0.65 | 51.0 | 3.23e-01 | 94.4% | 16.7% |
| 3441728 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.64 | 45.0 | 3.74e-01 | 79.6% | 40.0% |
| 4026181 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.63 | 54.0 | 4.44e-01 | 98.1% | 73.0% |
| 3855880 | 622.4.1.19 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 | 0.62 | 49.0 | 4.01e-01 | 88.9% | 74.3% |
| 3934503 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.57 | 39.0 | 4.09e-01 | 74.1% | 84.0% |
| 3382585 | 109.4.1.1166 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MED33_TPR-like_mid | 0.54 | 44.0 | 3.16e-01 | 98.1% | 85.1% |
| 3564291 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.52 | 46.0 | 3.99e-01 | 100.0% | 69.4% |
D2
medium
residues 55-126
Domain cluster:
rep: ac75__YP_009133278__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929__D57-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06648.18 best | AcMNPV_Ac75 | 81.4 | 8.80e-23 | 100.0% | 58.5% |