←Back to structures

hypothetical_protein_KM620_gp086

Euk-Vir

Hyposidra_talaca_nucleopolyhedrovirus

hypothetical_protein_KM620_gp086__YP_010086353__Hyposidra_talaca_nucleopolyhedrovirus__1070315

Identity

Accession:: YP_010086353 ↗
Protein ID:: hypothetical_protein_KM620_gp086
Kingdom:: euk

Quality

64.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Hyposidra_talaca_nucleopolyhedrovirus

TaxID: 1070315

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-63

PDB

Domain cluster: rep: p40__YP_009118533__Condylorrhiza_vestigialis_MNPV__1592576__D3-59

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05815.18 best	AcMNPV_Orf101	77.1	1.90e-21	100.0%	16.7%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4rg8A04	1.10.287.1240	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.70	42.0	4.23e-01	73.8%	59.7%
4nqfA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.67	55.0	4.14e-01	90.2%	66.2%
4hr1A00	1.20.1270.410	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.63	51.0	4.27e-01	95.1%	76.3%
2oyoA02	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.57	44.0	3.49e-01	83.6%	77.6%
2pmbA01	3.30.1850.10	Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like	0.54	49.0	4.06e-01	100.0%	99.1%
4dq5B00	1.10.530.50	Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40	0.52	41.0	3.12e-01	90.2%	56.2%
2oznB01	1.20.1270.90	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like	0.51	43.0	4.00e-01	100.0%	96.2%
3rgoA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.51	44.0	3.33e-01	100.0%	98.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3278802	4168.1.1.1 ↗	alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP	0.72	37.0	3.94e-01	80.3%	56.4%
4225227	142.1.1.2 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2,Sigma70_ner	0.67	53.0	3.25e-01	85.2%	36.7%
4927922	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.65	40.0	4.03e-01	80.3%	63.3%
4521514	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.60	43.0	4.04e-01	75.4%	82.7%
3903902	4967.1.1.0 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases	0.58	47.0	4.38e-01	95.1%	75.0%
3919392	101.1.8.0 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes	0.58	46.0	3.74e-01	88.5%	49.2%
3864571	632.22.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats	0.52	42.0	4.06e-01	100.0%	93.3%
3725619	2004.1.1.366 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N	0.51	42.0	2.68e-01	91.8%	19.7%
3823991	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.51	42.0	3.64e-01	100.0%	78.1%

D2 high residues 124-225

PDB

Domain cluster: rep: P40__YP_009552645__Operophtera_brumata_nucleopolyhedrovirus__1046267__D105-208

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05815.18 best	AcMNPV_Orf101	138.5	4.30e-40	100.0%	28.6%

D3 medium residues 250-346

PDB