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hypothetical_protein_KM621_gp06

Euk-Vir

Maize_yellow_striate_virus

hypothetical_protein_KM621_gp06__YP_010086414__Maize_yellow_striate_virus__1168550

Identity

Accession:
YP_010086414 ↗
Protein ID:
hypothetical_protein_KM621_gp06
Kingdom:
euk

Quality

73.2 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Betacytorhabdovirus› Maize_yellow_striate_virus

TaxID: 1168550

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-104
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pfnC02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.73 56.0 4.99e-01 80.8% 99.3%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.72 28.0 3.52e-01 77.8% 57.4%
2wnwA01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 53.0 5.25e-01 83.8% 100.0%
2q5fA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.64 49.0 4.46e-01 80.8% 99.3%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 30.0 2.66e-01 87.9% 31.0%
3weoA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.59 43.0 3.16e-01 75.8% 37.0%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.59 37.0 3.93e-01 74.7% 70.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.59 47.0 2.89e-01 83.8% 98.7%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.57 46.0 3.76e-01 86.9% 98.4%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 30.0 3.72e-01 88.9% 89.7%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 46.0 3.30e-01 90.9% 87.6%
3uaqB01 2.40.128.250 Mainly Beta › Beta Barrel › Lipocalin › 0.55 42.0 4.11e-01 82.8% 97.3%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.54 31.0 3.97e-01 84.8% 95.0%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 32.0 2.19e-01 90.9% 17.1%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 39.0 3.26e-01 78.8% 68.9%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.53 38.0 3.20e-01 75.8% 89.1%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 29.0 3.47e-01 90.9% 85.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.52 38.0 3.31e-01 75.8% 75.3%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.63e-01 94.9% 79.2%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 46.0 4.28e-01 100.0% 83.1%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 41.0 3.21e-01 90.9% 85.7%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.57e-01 96.0% 80.8%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 35.0 3.00e-01 73.7% 93.9%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3919312 4004.1.1.3 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C 0.73 57.0 4.48e-01 81.8% 84.1%
4101980 4004.1.1.3 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C 0.70 54.0 4.47e-01 81.8% 83.2%
4174483 4004.1.1.3 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C 0.64 50.0 4.21e-01 81.8% 83.0%
4108772 243.3.1.10 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.63 32.0 3.71e-01 88.9% 66.7%
3505038 220.1.1.159 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP 0.63 56.0 4.63e-01 99.0% 88.6%
2641778 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.61 33.0 3.63e-01 70.7% 62.2%
3256082 220.1.1.153 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 0.61 55.0 4.83e-01 100.0% 94.5%
4216191 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.61 33.0 3.28e-01 86.9% 49.5%
2755883 331.19.1.1 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin 0.60 37.0 3.89e-01 73.7% 67.4%
3796352 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 33.0 3.98e-01 84.8% 87.7%
3280720 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.56 45.0 3.73e-01 85.9% 94.9%
4946504 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 32.0 3.68e-01 88.9% 78.6%
3625965 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.54 30.0 3.05e-01 100.0% 52.6%
3911919 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.54 43.0 2.89e-01 85.9% 94.9%
3705756 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 45.0 3.89e-01 90.9% 76.0%
3967853 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.53 34.0 3.29e-01 88.9% 57.4%
3791839 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.52 29.0 3.20e-01 100.0% 65.0%
2336349 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 32.0 3.34e-01 86.9% 67.4%
3953672 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.52 37.0 3.19e-01 74.7% 90.3%
4990115 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.51 30.0 3.18e-01 85.9% 63.3%
3580950 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 44.0 3.25e-01 98.0% 73.3%