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hypothetical_protein_KM622_gp103
Euk-VirSpodoptera_exempta_nucleopolyhedrovirus
hypothetical_protein_KM622_gp103__YP_010086521__Spodoptera_exempta_nucleopolyhedrovirus__1242863
Identity
- Accession:
- YP_010086521 ↗
- Protein ID:
- hypothetical_protein_KM622_gp103
- Kingdom:
- euk
Quality
70.2
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_exempta_nucleopolyhedrovirus
TaxID: 1242863
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-85
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e9sA02 | 1.10.8.1190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain | 0.66 | 56.0 | 4.56e-01 | 100.0% | 67.7% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.64 | 35.0 | 4.24e-01 | 70.5% | 94.1% |
| 4gc5A02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.63 | 49.0 | 4.35e-01 | 85.2% | 64.4% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.61 | 35.0 | 3.74e-01 | 80.3% | 65.4% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 52.0 | 4.04e-01 | 100.0% | 49.3% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.59 | 39.0 | 4.04e-01 | 90.2% | 73.2% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 41.0 | 3.71e-01 | 75.4% | 66.7% |
| 4hjhA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.57 | 43.0 | 3.49e-01 | 80.3% | 96.5% |
| 7zhgO01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 44.0 | 4.30e-01 | 90.2% | 90.9% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.54 | 37.0 | 2.72e-01 | 70.5% | 62.7% |
| 4ua8A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 37.0 | 2.73e-01 | 75.4% | 39.2% |
| 7ep3A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 39.0 | 2.65e-01 | 82.0% | 45.2% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 44.0 | 3.36e-01 | 93.4% | 51.1% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.50 | 37.0 | 2.71e-01 | 80.3% | 73.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3317170 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.70 | 42.0 | 4.65e-01 | 70.5% | 80.0% |
| 3237277 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 51.0 | 3.97e-01 | 90.2% | 58.0% |
| 3555324 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.64 | 49.0 | 4.07e-01 | 83.6% | 52.7% |
| 3570006 | 386.1.1.37 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn-C2H2_12 | 0.62 | 32.0 | 4.13e-01 | 80.3% | 100.0% |
| 3931671 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.61 | 52.0 | 3.87e-01 | 100.0% | 53.3% |
| 2389398 | 386.1.1.37 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn-C2H2_12 | 0.60 | 35.0 | 4.15e-01 | 96.7% | 100.0% |
| 3212277 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 47.0 | 3.55e-01 | 95.1% | 58.9% |
| 3699757 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.58 | 40.0 | 3.83e-01 | 72.1% | 85.7% |
| 3399672 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.57 | 39.0 | 3.86e-01 | 75.4% | 67.7% |
| 3563442 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.55 | 40.0 | 3.73e-01 | 75.4% | 92.0% |
| 4492160 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.55 | 40.0 | 3.67e-01 | 80.3% | 60.0% |
| 3388225 | 857.1.1.0 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like | 0.54 | 40.0 | 3.98e-01 | 100.0% | 80.0% |
| 3708825 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 36.0 | 3.98e-01 | 72.1% | 91.1% |
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.54 | 40.0 | 3.81e-01 | 93.4% | 65.3% |
| 4024189 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 44.0 | 3.75e-01 | 98.4% | 75.5% |
| 4199246 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.53 | 31.0 | 2.76e-01 | 77.0% | 36.7% |
| 4284036 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.53 | 42.0 | 3.52e-01 | 86.9% | 50.5% |
| 5083835 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 40.0 | 2.52e-01 | 83.6% | 37.1% |
| 4999419 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.52 | 43.0 | 2.89e-01 | 98.4% | 54.6% |
| 3247445 | 4099.1.1.1 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD | 0.52 | 41.0 | 3.35e-01 | 93.4% | 59.2% |
| 3386136 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.51 | 41.0 | 3.84e-01 | 86.9% | 72.0% |