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hypothetical_protein_KM710_gp64

Euk-Vir

Vombatid_gammaherpesvirus_1

hypothetical_protein_KM710_gp64__YP_010087439__Vombatid_gammaherpesvirus_1__2052651

Identity

Accession:: YP_010087439 ↗
Protein ID:: hypothetical_protein_KM710_gp64
Kingdom:: euk

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Vombatid_gammaherpesvirus_1

TaxID: 2052651

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 162-315

PDB

Domain cluster: rep: nuclear_egress_lamina_protein__YP_009176906__Testudinid_alphaherpesvirus_3__2560801__D127-287

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02718.21 best	Herpes_UL31	140.6	6.50e-41	100.0%	66.8%

D2 medium residues 101-151

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02718.21 best	Herpes_UL31	41.2	1.70e-10	98.0%	16.4%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4zudA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	44.0	2.95e-01	100.0%	40.2%
1flcB00	3.90.20.10	Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B ›	0.55	38.0	2.75e-01	74.5%	94.4%
4b3xA02	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	37.0	2.65e-01	74.5%	49.4%
3u1nB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.54	42.0	2.73e-01	98.0%	33.8%
4cbvA02	2.40.50.1020	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain	0.54	41.0	3.25e-01	86.3%	98.3%
1x43A01	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.54	37.0	3.56e-01	74.5%	71.0%
1u6gC00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.53	43.0	2.34e-01	100.0%	8.4%
2innB00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.52	45.0	2.59e-01	100.0%	51.3%
2xrfC00	3.40.50.1580	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain	0.51	36.0	2.34e-01	80.4%	52.1%
5e0sB00	3.90.226.10	Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1	0.50	37.0	2.53e-01	80.4%	47.3%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3287378	601.23.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III	0.58	41.0	2.62e-01	76.5%	56.2%
3163818	6045.1.1.1 ↗	a+b complex topology › C-terminal domain of BipA › C-terminal domain of BipA › C-terminal domain of BipA › BipA_C	0.54	42.0	3.23e-01	100.0%	36.0%
4208861	2004.1.1.224 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_SecA	0.53	41.0	2.72e-01	90.2%	93.5%
3790018	3343.1.1.2 ↗	alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal	0.52	43.0	2.46e-01	96.1%	20.7%
3277064	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.52	35.0	2.49e-01	70.6%	34.1%
3999359	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.52	37.0	2.99e-01	84.3%	60.0%
3340161	223.1.1.1 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PHY	0.51	38.0	2.75e-01	88.2%	67.6%
4993096	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	38.0	3.36e-01	84.3%	71.2%
3741979	3866.1.1.2 ↗	extended segments › Mitochondrial 54S ribosomal protein L25 › Mitochondrial 54S ribosomal protein L25 › Mitochondrial 54S ribosomal protein L25 › Mitoc_mL59	0.50	34.0	2.64e-01	82.4%	28.5%
5079818	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.50	38.0	3.21e-01	84.3%	63.3%
4253864	7581.1.1.6 ↗	a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C	0.50	31.0	2.52e-01	74.5%	27.0%
3325708	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.50	40.0	2.63e-01	100.0%	29.7%