←Back to structures

hypothetical_protein_KM759_gp098

Euk-Vir

Lymphocystis_disease_virus_4

hypothetical_protein_KM759_gp098__YP_010087971__Lymphocystis_disease_virus_4__2704413

Identity

Accession:
YP_010087971 ↗
Protein ID:
hypothetical_protein_KM759_gp098
Kingdom:
euk

Quality

67.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Lymphocystivirus› Lymphocystis_disease_virus_4

TaxID: 2704413

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-82
PDB
Domain cluster: rep: hypothetical_protein_BZK12_gp015__YP_009342083__Lymphocystis_disease_virus_Sa__1898060__D10-52
D2 high residues 90-274
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 25.0 3.86e-01 97.8% 84.2%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 24.0 3.62e-01 97.8% 84.2%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 24.0 3.45e-01 93.0% 77.1%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 22.0 3.58e-01 96.8% 100.0%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 23.0 3.27e-01 99.5% 72.1%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 20.0 3.19e-01 85.4% 77.6%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.58 23.0 3.30e-01 97.8% 76.4%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 23.0 3.48e-01 98.4% 86.8%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 21.0 3.06e-01 97.8% 71.2%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.56 24.0 3.40e-01 99.5% 82.1%
2gqwA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 19.0 2.68e-01 95.1% 58.4%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 21.0 3.07e-01 88.6% 82.4%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.53 29.0 3.62e-01 97.3% 85.8%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 18.0 2.82e-01 96.2% 75.0%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 16.0 2.21e-01 76.2% 49.5%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 23.0 3.19e-01 94.6% 86.9%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3329059 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.56 18.0 3.08e-01 76.8% 94.0%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.55 22.0 3.21e-01 99.5% 82.7%
2664854 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.55 21.0 2.77e-01 97.3% 57.8%
5045227 244.2.1.7 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.54 21.0 2.94e-01 97.3% 71.2%
5052568 244.2.1.7 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.53 20.0 2.87e-01 96.2% 71.2%
5078434 244.2.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.53 20.0 2.66e-01 97.8% 58.0%
1290562 3863.1.1.2 ↗ beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › R_equi_Vir 0.53 29.0 3.62e-01 97.3% 85.8%
3824346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 21.0 3.01e-01 98.4% 77.5%
4041523 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 26.0 3.24e-01 100.0% 73.9%
3624912 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 21.0 2.81e-01 74.6% 69.0%