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hypothetical_protein_LAU_0017

Euk-Vir

Lausannevirus

hypothetical_protein_LAU_0017__YP_004346985__Lausannevirus__999883

Identity

Accession:
YP_004346985 ↗
Protein ID:
hypothetical_protein_LAU_0017
Kingdom:
euk

Quality

82.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Lausannevirus

TaxID: 999883

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-113
PDB
Domain cluster: rep: hypothetical_protein_MEL_003__YP_009094504__Melbournevirus__1560514__D5-93
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.59 41.0 3.54e-01 70.6% 69.3%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 39.0 3.86e-01 100.0% 63.2%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.59e-01 70.6% 84.4%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.80e-01 76.1% 99.2%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.55 43.0 4.51e-01 100.0% 91.0%
1tu5A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 4.40e-01 100.0% 81.1%
1w7cA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 44.0 4.34e-01 96.3% 84.3%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 44.0 3.67e-01 95.4% 51.1%
3cb6A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.54 41.0 3.11e-01 81.7% 82.3%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.53 41.0 4.31e-01 97.2% 89.8%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 4.00e-01 87.2% 93.4%
2gu1A02 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 4.24e-01 83.5% 99.0%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 45.0 3.87e-01 96.3% 86.6%
1lqlA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.52 36.0 3.72e-01 86.2% 74.8%
5u3fB01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.51 37.0 3.46e-01 76.1% 99.3%
5iz3A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.50 44.0 3.72e-01 93.6% 97.1%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.50 28.0 2.79e-01 85.3% 49.6%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.50 40.0 3.33e-01 83.5% 52.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3226910 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.64 41.0 3.21e-01 89.9% 31.8%
3243587 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 40.0 2.88e-01 89.9% 22.2%
3175551 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.57 43.0 3.55e-01 80.7% 86.0%
3589894 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 52.0 4.48e-01 100.0% 96.4%
3860829 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 50.0 4.18e-01 100.0% 77.4%
4419521 243.1.1.108 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_YvbJ 0.54 39.0 3.67e-01 76.1% 100.0%
3767166 79.1.1.31 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › ITI_HC_C 0.53 34.0 3.66e-01 78.0% 74.7%
4467977 330.1.1.19 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 0.53 40.0 4.09e-01 100.0% 83.8%
3996763 11.1.1.351 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.53 36.0 4.02e-01 74.3% 88.2%
4016704 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.52 41.0 3.63e-01 82.6% 79.4%
3299839 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.52 45.0 3.30e-01 97.2% 89.4%
3744813 2007.2.3.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N 0.52 42.0 3.12e-01 87.2% 58.6%
4035804 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.52 42.0 3.77e-01 86.2% 78.0%
3209799 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.52 40.0 3.73e-01 82.6% 78.6%
3175625 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.52 46.0 3.83e-01 100.0% 89.1%
3325426 2007.2.3.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N 0.51 41.0 3.44e-01 86.2% 97.4%
3444245 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.51 33.0 3.87e-01 81.7% 96.0%
3703973 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 46.0 4.35e-01 100.0% 97.7%
3653397 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.51 44.0 3.16e-01 95.4% 85.8%
3685970 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 37.0 3.22e-01 77.1% 88.2%
3386481 3953.1.1.0 ↗ a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain 0.50 37.0 3.90e-01 78.9% 98.0%
3691478 331.3.1.46 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF7053 0.50 44.0 3.59e-01 100.0% 73.5%
4012027 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.50 40.0 3.53e-01 99.1% 57.6%
3943581 881.4.1.1 ↗ a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › MucB_RseB_C 0.50 38.0 3.80e-01 100.0% 80.0%
D2 medium residues 119-183
PDB
Domain cluster: rep: hypothetical_protein_MEL_400__YP_009094901__Melbournevirus__1560514__D150-207