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hypothetical_protein_LAU_0080

Euk-Vir

Lausannevirus

hypothetical_protein_LAU_0080__YP_004347046__Lausannevirus__999883

Identity

Accession:
YP_004347046 ↗
Protein ID:
hypothetical_protein_LAU_0080
Kingdom:
euk

Quality

76.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Lausannevirus

TaxID: 999883

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-90
PDB
Domain cluster: rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.91e-01 86.1% 62.1%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.56 44.0 3.86e-01 86.1% 65.6%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 4.01e-01 84.8% 68.3%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.54 27.0 3.23e-01 83.5% 70.6%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 4.28e-01 94.9% 85.9%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.21e-01 98.7% 85.4%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.53 45.0 3.88e-01 100.0% 91.8%
2drvA00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.52 45.0 3.47e-01 98.7% 75.4%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 3.88e-01 79.7% 96.4%
1n6zA00 3.10.20.250 Alpha Beta › Roll › Ubiquitin-like (UB roll) › YML108W-like 0.52 44.0 4.11e-01 98.7% 95.2%
4q6rA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 41.0 3.57e-01 98.7% 55.0%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 38.0 2.85e-01 83.5% 93.2%
3wuhA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 36.0 2.94e-01 78.5% 81.5%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.50 36.0 2.95e-01 74.7% 64.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946107 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.77 69.0 6.52e-01 98.7% 96.8%
3597677 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.74 66.0 6.04e-01 100.0% 98.1%
4991854 5104.1.1.0 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.69 53.0 4.98e-01 97.5% 68.4%
4174001 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.65 43.0 4.60e-01 87.3% 81.5%
4275730 4076.2.1.0 ↗ a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like 0.62 54.0 4.52e-01 98.7% 70.7%
3701635 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.60 49.0 4.62e-01 98.7% 75.8%
4129946 7577.1.1.4 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC 0.57 39.0 2.50e-01 70.9% 53.6%
3639782 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 44.0 3.88e-01 89.9% 98.5%
3690599 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.55 48.0 3.16e-01 98.7% 29.0%
3800494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 36.0 3.03e-01 100.0% 40.3%
3938714 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 35.0 3.05e-01 100.0% 42.4%
4116831 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.53 43.0 2.91e-01 94.9% 97.8%
3184467 304.120.1.10 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 0.53 37.0 4.14e-01 82.3% 98.3%
4237828 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.53 42.0 3.33e-01 93.7% 95.9%
3672886 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 37.0 4.09e-01 92.4% 100.0%
5046635 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 40.0 4.01e-01 100.0% 86.3%
3948578 327.16.1.7 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Rhomboid_N 0.51 35.0 3.63e-01 81.0% 80.0%
4216893 2.1.1.31 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C 0.50 38.0 3.27e-01 82.3% 54.1%
D2 high residues 99-174
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp465__YP_009507227__Tunisvirus_fontaine2__1421067__D94-166
D3 high residues 181-275
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp465__YP_009507227__Tunisvirus_fontaine2__1421067__D173-262