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hypothetical_protein_LAU_0116
Euk-VirLausannevirus
hypothetical_protein_LAU_0116__YP_004347080__Lausannevirus__999883
Identity
- Accession:
- YP_004347080 ↗
- Protein ID:
- hypothetical_protein_LAU_0116
- Kingdom:
- euk
Quality
75.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Losannavirus›
Lausannevirus
TaxID: 999883
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-66
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19262.5 best | DUF5905 | 27.3 | 5.70e-06 | 64.4% | 30.6% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.66 | 38.0 | 4.05e-01 | 72.9% | 65.4% |
| 6k41R00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.64 | 51.0 | 3.37e-01 | 86.4% | 85.6% |
| 1c02A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.64 | 53.0 | 3.88e-01 | 93.2% | 62.0% |
| 2l9bA00 | 1.25.40.630 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 45.0 | 3.87e-01 | 83.1% | 72.5% |
| 1rsoA01 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 38.0 | 4.07e-01 | 78.0% | 78.4% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 41.0 | 2.82e-01 | 79.7% | 84.2% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 44.0 | 2.92e-01 | 89.8% | 81.1% |
| 7z7vF03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.56 | 43.0 | 3.82e-01 | 84.7% | 93.2% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.51e-01 | 100.0% | 63.2% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.53 | 46.0 | 3.63e-01 | 98.3% | 86.4% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 39.0 | 3.55e-01 | 83.1% | 73.3% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 39.0 | 3.90e-01 | 79.7% | 81.7% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.52 | 43.0 | 2.99e-01 | 98.3% | 48.6% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.51 | 39.0 | 3.00e-01 | 84.7% | 74.0% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 43.0 | 3.87e-01 | 100.0% | 72.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2583940 | 601.7.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas_Csm6_HEPN | 0.69 | 48.0 | 3.46e-01 | 74.6% | 83.9% |
| None | — | 0.64 | 51.0 | 3.22e-01 | 88.1% | 82.2% | |
| 3224300 | 5001.1.1.60 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx | 0.60 | 46.0 | 2.94e-01 | 83.1% | 81.0% |
| 3219667 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 39.0 | 2.70e-01 | 76.3% | 75.7% |
| 3967891 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 42.0 | 3.89e-01 | 100.0% | 82.4% |
| 3213629 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.51 | 42.0 | 2.75e-01 | 100.0% | 71.6% |
| 5047904 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.51 | 43.0 | 3.85e-01 | 100.0% | 82.2% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 42.0 | 3.80e-01 | 100.0% | 71.1% |
| 4996889 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.51 | 42.0 | 2.76e-01 | 98.3% | 69.5% |
| 4380346 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 43.0 | 3.81e-01 | 100.0% | 70.0% |
| 4383339 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 42.0 | 3.74e-01 | 100.0% | 67.4% |
| 3943933 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 42.0 | 3.78e-01 | 100.0% | 73.3% |
| 3968471 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.50 | 41.0 | 3.75e-01 | 100.0% | 70.0% |
| 3627133 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.50 | 43.0 | 3.09e-01 | 100.0% | 78.9% |
D2
high
residues 70-141