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hypothetical_protein_LAU_0348
Euk-VirLausannevirus
hypothetical_protein_LAU_0348__YP_004347311__Lausannevirus__999883
Identity
- Accession:
- YP_004347311 ↗
- Protein ID:
- hypothetical_protein_LAU_0348
- Kingdom:
- euk
Quality
71.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Losannavirus›
Lausannevirus
TaxID: 999883
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.58 | 47.0 | 3.17e-01 | 93.1% | 44.5% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.57 | 41.0 | 3.30e-01 | 75.9% | 51.4% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 47.0 | 2.99e-01 | 94.8% | 48.0% |
| 3hulA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.56 | 42.0 | 3.38e-01 | 81.0% | 59.1% |
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.56 | 48.0 | 2.96e-01 | 98.3% | 52.6% |
| 3zlaD01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.54 | 47.0 | 3.70e-01 | 98.3% | 83.3% |
| 2yukA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.53 | 37.0 | 3.33e-01 | 87.9% | 50.0% |
| 6hogA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 38.0 | 3.06e-01 | 81.0% | 83.7% |
| 3hynA00 | 3.40.50.11200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 37.0 | 2.62e-01 | 77.6% | 25.8% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 38.0 | 2.92e-01 | 81.0% | 54.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943726 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.65 | 46.0 | 2.52e-01 | 75.9% | 11.0% |
| 5071471 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.63 | 44.0 | 3.59e-01 | 72.4% | 84.8% |
| 80936 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.62 | 44.0 | 3.27e-01 | 79.3% | 35.4% |
| 3238197 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.62 | 44.0 | 3.23e-01 | 79.3% | 35.0% |
| 3606775 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.59 | 44.0 | 2.91e-01 | 86.2% | 36.6% |
| 3598480 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 41.0 | 2.99e-01 | 77.6% | 45.1% |
| 3596261 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 41.0 | 2.92e-01 | 77.6% | 43.3% |
| 3790110 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 40.0 | 3.12e-01 | 81.0% | 75.9% |
| 4459698 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 45.0 | 4.18e-01 | 91.4% | 73.3% |
| 3633338 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 37.0 | 2.69e-01 | 72.4% | 32.0% |
| 3486754 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 38.0 | 3.86e-01 | 94.8% | 83.6% |
| 4677652 | 2004.1.1.1017 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12, UvrD_C | 0.52 | 43.0 | 2.86e-01 | 100.0% | 43.4% |
D2
medium
residues 59-123
D3
medium
residues 124-173
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cuqA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.86 | 54.0 | 4.50e-01 | 72.0% | 40.0% |
| 2cszA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 50.0 | 4.32e-01 | 72.0% | 43.4% |
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.74 | 52.0 | 4.55e-01 | 74.0% | 75.0% |
| 2miuA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.73 | 51.0 | 4.05e-01 | 74.0% | 55.1% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.73 | 51.0 | 4.50e-01 | 74.0% | 73.6% |
| 2vrwB03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.73 | 48.0 | 4.73e-01 | 70.0% | 64.2% |
| 1x68A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.72 | 51.0 | 4.37e-01 | 74.0% | 75.0% |
| 1x4wA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.70 | 51.0 | 4.67e-01 | 78.0% | 61.2% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.70 | 49.0 | 4.63e-01 | 74.0% | 86.7% |
| 2mbvA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.68 | 49.0 | 3.94e-01 | 98.0% | 40.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3173007 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.87 | 53.0 | 4.70e-01 | 70.0% | 44.3% |
| 3394712 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.86 | 58.0 | 6.59e-01 | 72.0% | 100.0% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.85 | 52.0 | 6.03e-01 | 70.0% | 88.6% |
| 4000690 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.82 | 56.0 | 5.67e-01 | 72.0% | 72.0% |
| 3522523 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 55.0 | 6.04e-01 | 70.0% | 87.5% |
| 5045480 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 50.0 | 5.65e-01 | 70.0% | 88.6% |
| 3264964 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.81 | 56.0 | 6.19e-01 | 72.0% | 90.0% |
| 4945028 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.78 | 51.0 | 4.45e-01 | 70.0% | 45.9% |
| 1016657 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.78 | 50.0 | 4.32e-01 | 72.0% | 43.4% |
| 3224089 | 376.1.2.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM | 0.78 | 54.0 | 4.97e-01 | 74.0% | 96.9% |
| 4062734 | 377.1.1.110 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF30316 | 0.77 | 52.0 | 5.64e-01 | 70.0% | 90.0% |
| 3547416 | 376.1.3.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 | 0.71 | 49.0 | 4.76e-01 | 72.0% | 78.2% |
| 3394482 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 45.0 | 4.80e-01 | 70.0% | 95.0% |
| 3559714 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.67 | 47.0 | 4.89e-01 | 72.0% | 86.7% |
| 3883588 | 604.1.1.125 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SYNRG_C | 0.65 | 54.0 | 3.66e-01 | 92.0% | 86.7% |
| 3546355 | 376.1.3.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_RING_Vps8 | 0.63 | 43.0 | 4.04e-01 | 74.0% | 61.5% |
| 3927094 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.57 | 49.0 | 4.39e-01 | 96.0% | 84.3% |
| 3170713 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 42.0 | 2.62e-01 | 88.0% | 33.2% |