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hypothetical_protein_LAU_0424

Euk-Vir

Lausannevirus

hypothetical_protein_LAU_0424__YP_004347386__Lausannevirus__999883

Identity

Accession:
YP_004347386 ↗
Protein ID:
hypothetical_protein_LAU_0424
Kingdom:
euk

Quality

70.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Lausannevirus

TaxID: 999883

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-50
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00646.39 best F-box 36.6 4.00e-09 93.5% 93.0%
PF12937.13 F-box-like 34.8 1.60e-08 84.8% 68.1%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 79.0 7.93e-01 95.7% 95.7%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.88 76.0 4.65e-01 100.0% 17.0%
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.88 67.0 7.28e-01 82.6% 100.0%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.85 76.0 6.04e-01 97.8% 63.2%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.82 62.0 6.47e-01 87.0% 90.2%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.81 72.0 5.79e-01 100.0% 92.0%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.80 70.0 5.48e-01 100.0% 75.8%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.78 69.0 5.36e-01 100.0% 60.0%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 62.0 6.44e-01 95.7% 100.0%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.76 64.0 4.38e-01 97.8% 29.5%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.73 64.0 4.82e-01 100.0% 67.9%
3dwlG00 1.25.40.190 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 0.72 55.0 4.25e-01 89.1% 77.2%
2l9bA00 1.25.40.630 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.70 54.0 4.45e-01 89.1% 74.7%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 59.0 5.27e-01 95.7% 98.5%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 58.0 4.95e-01 100.0% 90.9%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.67 52.0 5.01e-01 93.5% 96.5%
2zfuA01 1.10.10.2150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal RNA-processing protein 8, N-terminal domain 0.66 46.0 4.50e-01 76.1% 76.5%
2aw6A02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 53.0 3.45e-01 100.0% 23.1%
1doqA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.62 47.0 4.18e-01 84.8% 76.8%
2id3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 53.0 3.77e-01 97.8% 54.2%
3guyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 51.0 3.40e-01 97.8% 36.8%
5unaD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.30e-01 97.8% 90.5%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 3.96e-01 97.8% 69.4%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 41.0 3.47e-01 89.1% 55.6%
5jy1A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 2.71e-01 93.5% 16.2%
1z1vA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.53 43.0 3.83e-01 93.5% 70.0%
2i7nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 41.0 2.95e-01 95.7% 30.3%
1wxpA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 37.0 3.22e-01 82.6% 54.8%
1ciiA03 1.10.490.30 Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin 0.51 42.0 2.91e-01 91.3% 38.2%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.51 37.0 2.64e-01 91.3% 60.0%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3270939 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.95 78.0 8.30e-01 91.3% 100.0%
3795292 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.94 76.0 8.09e-01 89.1% 100.0%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 76.0 7.72e-01 87.0% 88.9%
3735929 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 79.0 6.58e-01 91.3% 56.0%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 86.0 6.22e-01 100.0% 40.0%
3221696 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.92 76.0 4.35e-01 89.1% 16.8%
3219180 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 75.0 7.94e-01 93.5% 100.0%
3751898 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.92 79.0 6.69e-01 93.5% 60.0%
3189379 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 84.0 7.38e-01 100.0% 72.3%
3820691 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 74.0 7.83e-01 87.0% 100.0%
3417160 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 80.0 6.10e-01 95.7% 45.3%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.92 77.0 7.86e-01 91.3% 93.3%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.91 82.0 5.03e-01 97.8% 19.2%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 79.0 6.99e-01 95.7% 67.7%
3688419 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 73.0 7.74e-01 91.3% 100.0%
3360537 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 69.0 7.33e-01 82.6% 100.0%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 78.0 6.64e-01 95.7% 61.4%
None — 0.90 82.0 4.52e-01 100.0% 11.4%
3432900 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 71.0 7.17e-01 84.8% 88.9%
3408565 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 76.0 7.72e-01 93.5% 100.0%
3402608 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 76.0 7.44e-01 93.5% 88.0%
3233030 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 73.0 7.73e-01 91.3% 100.0%
3636704 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 79.0 5.69e-01 95.7% 91.3%
3331704 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 79.0 7.67e-01 97.8% 92.0%
3215203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 71.0 7.47e-01 91.3% 100.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 70.0 7.43e-01 93.5% 100.0%
3468667 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.88 78.0 4.67e-01 97.8% 27.2%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.88 79.0 4.63e-01 100.0% 20.9%
3173927 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 74.0 7.55e-01 95.7% 95.6%
4446417 145.1.1.31 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 0.87 75.0 7.36e-01 95.7% 88.0%
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 73.0 7.17e-01 93.5% 88.0%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.87 79.0 4.49e-01 100.0% 14.8%
3726245 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 77.0 7.47e-01 95.7% 90.0%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.87 78.0 4.39e-01 100.0% 15.8%
3569619 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 70.0 7.06e-01 87.0% 93.3%
3217628 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 69.0 7.33e-01 89.1% 100.0%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 78.0 6.38e-01 97.8% 88.7%
3466008 207.1.1.96 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 0.87 74.0 4.21e-01 95.7% 13.8%
3273645 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 6.35e-01 97.8% 92.5%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 5.91e-01 100.0% 72.4%
3214169 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 73.0 7.43e-01 93.5% 100.0%
3239444 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 67.0 7.09e-01 84.8% 100.0%
3191984 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 70.0 5.35e-01 89.1% 41.0%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.86 74.0 4.79e-01 95.7% 39.5%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.41e-01 97.8% 88.0%
3422328 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 75.0 5.99e-01 95.7% 85.9%
3935864 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.85 76.0 4.27e-01 100.0% 18.6%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 75.0 6.15e-01 95.7% 86.3%
4017103 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.85 74.0 4.28e-01 95.7% 18.9%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 74.0 6.74e-01 95.7% 73.3%
3442643 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.85 76.0 4.20e-01 100.0% 11.3%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 75.0 7.60e-01 100.0% 100.0%
3226289 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 66.0 6.92e-01 91.3% 97.5%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 67.0 7.10e-01 93.5% 100.0%
3730054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 73.0 6.27e-01 93.5% 64.3%
3524044 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 73.0 7.46e-01 95.7% 97.8%
None — 0.84 75.0 4.22e-01 100.0% 20.6%
3501462 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 64.0 6.85e-01 87.0% 95.0%
3792735 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 75.0 4.29e-01 97.8% 20.1%
3220032 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 74.0 4.83e-01 100.0% 46.3%
3803880 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.83 74.0 4.28e-01 100.0% 29.1%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 5.48e-01 97.8% 89.1%
3419446 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 65.0 5.68e-01 95.7% 57.1%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 75.0 6.22e-01 100.0% 82.1%
3724474 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.83 74.0 4.16e-01 100.0% 15.0%
3837286 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 74.0 5.87e-01 100.0% 53.3%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 74.0 6.16e-01 100.0% 85.9%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 71.0 5.96e-01 95.7% 90.7%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 72.0 6.42e-01 97.8% 81.5%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 72.0 6.19e-01 97.8% 82.9%
3816173 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 69.0 3.99e-01 100.0% 19.4%
3231350 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 67.0 6.84e-01 97.8% 93.3%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 71.0 4.23e-01 97.8% 19.4%
3646855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 66.0 6.69e-01 95.7% 93.3%
3231309 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 70.0 7.06e-01 100.0% 100.0%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.81 72.0 4.09e-01 97.8% 16.4%
3459106 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 62.0 6.28e-01 87.0% 84.4%
3424908 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 71.0 5.39e-01 100.0% 90.7%
None — 0.81 72.0 4.11e-01 100.0% 21.8%
3808415 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.80 69.0 3.95e-01 100.0% 21.7%
3250931 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 70.0 5.98e-01 100.0% 86.7%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 69.0 5.56e-01 95.7% 74.1%
3244551 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 61.0 6.34e-01 91.3% 97.5%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 69.0 5.76e-01 100.0% 86.3%
None — 0.79 69.0 3.92e-01 100.0% 22.4%
3337545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 65.0 5.76e-01 91.3% 92.3%
3449733 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 66.0 3.82e-01 100.0% 24.0%
3449875 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 66.0 4.62e-01 100.0% 60.6%
3311874 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 66.0 5.63e-01 97.8% 93.3%
3445968 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 66.0 4.47e-01 100.0% 68.8%
3236656 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 63.0 4.58e-01 100.0% 73.6%
3223791 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 64.0 5.86e-01 95.7% 75.0%
4593317 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 64.0 5.87e-01 95.7% 75.0%
None — 0.75 65.0 3.77e-01 100.0% 33.8%
None — 0.75 64.0 3.70e-01 100.0% 24.8%
3812507 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 63.0 5.08e-01 97.8% 69.9%
3337395 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 63.0 3.64e-01 100.0% 22.5%
None — 0.74 62.0 3.57e-01 95.7% 15.2%
3437971 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 60.0 4.92e-01 95.7% 95.6%
3208423 109.3.1.168 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 0.73 63.0 3.54e-01 97.8% 11.8%
D2 medium residues 51-111
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 2.97e-01 80.3% 95.4%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.53 37.0 3.53e-01 96.7% 62.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942485 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.61 37.0 3.46e-01 93.4% 45.0%
3795831 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 39.0 3.82e-01 91.8% 60.3%
3588036 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 40.0 4.18e-01 90.2% 100.0%
D3 medium residues 112-189
PDB