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hypothetical_protein_MAR_ORF024

Euk-Vir

Marseillevirus_marseillevirus

hypothetical_protein_MAR_ORF024__YP_003406779__Marseillevirus_marseillevirus__694581

Identity

Accession:: YP_003406779 ↗
Protein ID:: hypothetical_protein_MAR_ORF024
Kingdom:: euk

Quality

73.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_marseillevirus

TaxID: 694581

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 166-265

PDB

Domain cluster: rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10544.16 best	T5orf172	43.1	6.80e-11	93.0%	92.9%
PF13455.13	MUG113	43.6	4.90e-11	78.0%	90.4%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4gzrC00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.85	25.0	3.30e-01	87.0%	45.9%
3v9rB00	1.10.20.10	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A	0.70	34.0	4.01e-01	98.0%	65.3%
1ir6A02	3.10.310.30	Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 ›	0.63	41.0	3.79e-01	90.0%	51.2%
4llgM00	3.10.20.510	Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor	0.57	30.0	3.90e-01	87.0%	100.0%
3q8gA01	1.10.8.20	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p	0.56	32.0	3.59e-01	86.0%	72.2%
1gep001	3.30.413.10	Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1	0.55	42.0	3.54e-01	92.0%	47.7%
6jlzA01	1.20.120.1070	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain	0.52	44.0	4.34e-01	99.0%	84.3%
4nv0A02	1.10.150.340	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain	0.52	32.0	3.47e-01	79.0%	74.4%

ECOD (19)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3597677	821.1.1.0 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease	0.86	76.0	7.53e-01	94.0%	94.3%
3740549	821.1.1.10 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113	0.85	76.0	6.51e-01	94.0%	84.5%
3613416	821.1.1.3 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172	0.84	75.0	6.99e-01	94.0%	82.5%
3946107	821.1.1.3 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172	0.83	69.0	7.16e-01	87.0%	97.9%
3197583	821.1.1.10 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113	0.83	76.0	5.97e-01	97.0%	83.4%
3698242	821.1.1.10 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113	0.80	71.0	6.57e-01	93.0%	81.3%
3689357	821.1.1.3 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172	0.80	75.0	6.24e-01	100.0%	70.3%
3579205	192.4.1.25 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Rad21_Rec8_N	0.65	34.0	3.52e-01	100.0%	54.7%
3340123	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.64	37.0	3.95e-01	98.0%	64.4%
5018894	304.3.1.0 ↗	a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain	0.62	35.0	4.21e-01	87.0%	86.2%
3597740	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.60	45.0	3.95e-01	98.0%	53.3%
4983245	242.2.1.2 ↗	a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N	0.57	33.0	3.67e-01	87.0%	73.3%
3504586	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.57	37.0	3.21e-01	98.0%	42.6%
4975176	304.3.1.0 ↗	a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain	0.57	34.0	3.86e-01	89.0%	82.9%
3734885	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.57	51.0	3.63e-01	100.0%	70.1%
3390562	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.56	32.0	3.69e-01	79.0%	78.6%
4928465	296.1.1.1 ↗	a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › NIR_SIR	0.55	42.0	3.87e-01	82.0%	100.0%
3175118	296.1.1.1 ↗	a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › NIR_SIR	0.54	42.0	3.20e-01	94.0%	35.7%
4270095	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.53	32.0	3.60e-01	78.0%	82.9%

D2 high residues 440-502

PDB

Domain cluster: rep: hypothetical_protein_LAU_0030__YP_004346998__Lausannevirus__999883__D437-497

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03457.20 best	HA	30.8	4.10e-07	90.5%	93.8%

D3 high residues 517-583

PDB

D4 medium residues 5-152

PDB

Domain cluster: rep: hypothetical_protein_LAU_0030__YP_004346998__Lausannevirus__999883__D5-146

D5 medium residues 299-432

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2wh5A00	1.20.80.10	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.52	27.0	3.25e-01	76.9%	74.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4145161	109.4.1.3068 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2225	0.53	44.0	4.02e-01	88.1%	100.0%