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hypothetical_protein_MAR_ORF058
Euk-VirMarseillevirus_marseillevirus
hypothetical_protein_MAR_ORF058__YP_003406806__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003406806 ↗
- Protein ID:
- hypothetical_protein_MAR_ORF058
- Kingdom:
- euk
Quality
67.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-74
D2
medium
residues 75-158
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lvuB00 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.60 | 47.0 | 3.42e-01 | 86.9% | 65.4% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.58 | 46.0 | 3.46e-01 | 88.1% | 57.0% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 47.0 | 3.37e-01 | 90.5% | 90.5% |
| 3pztB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 47.0 | 3.31e-01 | 95.2% | 43.2% |
| 3pamB00 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.56 | 43.0 | 3.22e-01 | 88.1% | 58.0% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.53 | 38.0 | 2.99e-01 | 76.2% | 51.9% |
| 3bh1A01 | 3.10.630.10 | Alpha Beta › Roll › dip2346 fold like › dip2346 domain like | 0.53 | 45.0 | 3.35e-01 | 100.0% | 53.6% |
| 3k1tA02 | 3.40.50.11280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutamate-cysteine ligase, N-terminal domain | 0.52 | 40.0 | 3.47e-01 | 84.5% | 73.4% |
| 3s95A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 40.0 | 3.11e-01 | 85.7% | 75.7% |
| 1umnG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 38.0 | 3.09e-01 | 81.0% | 85.5% |
| 3jw4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 33.0 | 2.93e-01 | 86.9% | 45.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939251 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.60 | 52.0 | 3.69e-01 | 100.0% | 40.7% |
| 4014174 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 47.0 | 3.74e-01 | 90.5% | 55.0% |
| 2774848 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.58 | 46.0 | 3.46e-01 | 88.1% | 57.3% |
| 3742452 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 46.0 | 3.15e-01 | 94.0% | 59.1% |
| 1518865 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.55 | 42.0 | 3.14e-01 | 86.9% | 64.2% |
| 4961408 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.55 | 43.0 | 3.14e-01 | 88.1% | 49.1% |
| 4961706 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.55 | 42.0 | 3.07e-01 | 86.9% | 57.5% |
| 3973137 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.55 | 42.0 | 3.04e-01 | 84.5% | 63.8% |
| 4321309 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.54 | 35.0 | 2.90e-01 | 86.9% | 34.8% |
| 3593794 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.53 | 33.0 | 3.93e-01 | 88.1% | 96.4% |
| 4888417 | 109.3.1.173 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, TRP_2, Ank_2, Ank_3 | 0.52 | 45.0 | 3.74e-01 | 100.0% | 59.2% |
| 4935305 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.51 | 41.0 | 2.98e-01 | 88.1% | 47.2% |
| 3976075 | 301.1.1.5 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › SpoU_sub_bind | 0.51 | 39.0 | 3.89e-01 | 86.9% | 81.2% |
| 4140152 | 2002.1.1.8 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase | 0.51 | 43.0 | 2.68e-01 | 100.0% | 45.7% |
| 3447640 | 2003.1.5.146 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GuanidinoAc_N-MeTrfase | 0.50 | 43.0 | 3.26e-01 | 100.0% | 57.0% |
| 3221366 | 101.1.2.281 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tfb2 | 0.50 | 33.0 | 3.70e-01 | 90.5% | 93.3% |