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hypothetical_protein_MAR_ORF111

Euk-Vir

Marseillevirus_marseillevirus

hypothetical_protein_MAR_ORF111__YP_003406858__Marseillevirus_marseillevirus__694581

Identity

Accession:
YP_003406858 ↗
Protein ID:
hypothetical_protein_MAR_ORF111
Kingdom:
euk

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-87
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 30.0 3.16e-01 90.4% 41.8%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 26.0 2.78e-01 100.0% 43.5%
2ezvA01 3.40.600.40 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Type II restriction enzyme SfiI, multifunctional domain 0.58 41.0 3.11e-01 75.3% 80.7%
8gr2A01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 38.0 2.94e-01 79.5% 96.9%
1h0hA02 3.40.50.740 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 35.0 2.59e-01 75.3% 97.9%
4k22B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 35.0 2.50e-01 74.0% 93.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4346261 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 39.0 2.59e-01 76.7% 33.4%
5026630 4246.1.1.0 a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit 0.54 40.0 2.69e-01 80.8% 65.2%
3193522 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 39.0 2.81e-01 82.2% 53.5%
3736358 2006.1.4.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › Fcf1 0.53 38.0 2.91e-01 79.5% 87.5%
3265360 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.52 35.0 2.82e-01 71.2% 96.9%
3500548 375.5.1.1 few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.51 34.0 3.59e-01 95.9% 81.7%
3203103 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 35.0 2.50e-01 74.0% 86.8%
D2 high residues 96-175
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3letA00 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.60 51.0 3.53e-01 97.5% 43.4%
1cmwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 42.0 3.46e-01 78.8% 82.8%
1cb8A01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.54 43.0 2.91e-01 87.5% 43.3%
3j27A05 1.20.1280.260 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.53 40.0 3.75e-01 81.2% 94.0%
2wssW01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.53 40.0 3.85e-01 100.0% 70.5%
4nlcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 44.0 3.16e-01 100.0% 90.1%
1werA02 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.51 36.0 3.02e-01 87.5% 40.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3812252 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.58 45.0 2.81e-01 88.7% 74.2%
4934760 141.1.1.1 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.55 41.0 2.91e-01 83.7% 99.3%
5051863 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 43.0 2.80e-01 97.5% 60.5%