Back to structures

hypothetical_protein_MEL_001

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_001__YP_009094502__Melbournevirus__1560514

Identity

Accession:
YP_009094502 ↗
Protein ID:
hypothetical_protein_MEL_001
Kingdom:
euk

Quality

82.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-89
PDB
D2 high residues 100-196
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.70 40.0 3.18e-01 88.7% 29.4%
3i3gA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 47.0 4.10e-01 74.2% 90.9%
2vi7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 43.0 3.60e-01 70.1% 80.4%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 43.0 3.65e-01 70.1% 83.6%
3g8wB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 43.0 3.55e-01 70.1% 78.7%
4e2aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 42.0 3.45e-01 70.1% 84.7%
1i12D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 48.0 4.08e-01 84.5% 87.9%
1tiqB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 42.0 3.49e-01 73.2% 80.4%
3igrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 47.0 3.76e-01 84.5% 78.7%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 48.0 4.01e-01 87.6% 75.3%
3i9sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 41.0 3.49e-01 74.2% 84.5%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.58 44.0 4.34e-01 84.5% 74.5%
2wpwC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 46.0 3.20e-01 86.6% 44.6%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.81e-01 83.5% 65.8%
1cm0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 40.0 3.39e-01 74.2% 79.6%
1q2yA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 38.0 3.40e-01 70.1% 81.4%
1qsmD00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 45.0 3.88e-01 86.6% 63.2%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.86e-01 76.3% 71.1%
5fvjA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 41.0 3.44e-01 77.3% 84.8%
3tt2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 44.0 3.11e-01 86.6% 43.2%
4pswA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 4.07e-01 88.7% 93.2%
4ua3A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 44.0 3.64e-01 89.7% 76.9%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.55 45.0 4.05e-01 89.7% 82.0%
6wqbA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 4.02e-01 89.7% 90.0%
2cxaA02 3.40.630.70 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain 0.55 44.0 3.72e-01 88.7% 76.2%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.54 48.0 4.27e-01 100.0% 81.4%
3owcB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 39.0 3.31e-01 76.3% 100.0%
4k7zA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 41.0 3.73e-01 97.9% 60.3%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.54 44.0 3.72e-01 89.7% 79.5%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 44.0 2.95e-01 90.7% 91.7%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.54 45.0 3.89e-01 93.8% 84.3%
3khyA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 39.0 3.16e-01 85.6% 39.7%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 45.0 3.34e-01 92.8% 52.4%
2fckA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.59e-01 89.7% 80.3%
4n81A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.52 39.0 3.53e-01 80.4% 89.0%
5ktaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.50e-01 90.7% 96.1%
4zboC00 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.51 46.0 3.42e-01 100.0% 77.8%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.51 41.0 3.39e-01 89.7% 95.1%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 42.0 4.18e-01 100.0% 90.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257844 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.74 44.0 3.45e-01 91.8% 29.0%
4936581 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.73 48.0 5.13e-01 100.0% 76.5%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.69 40.0 4.65e-01 74.2% 80.0%
3217981 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.69 40.0 3.28e-01 74.2% 32.4%
3224210 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.67 50.0 4.19e-01 77.3% 83.9%
3233598 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.66 49.0 4.38e-01 78.4% 94.8%
3610277 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.64 44.0 2.90e-01 70.1% 91.1%
3614294 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.63 45.0 3.63e-01 74.2% 73.0%
3908724 71.1.1.1 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.63 39.0 3.18e-01 90.7% 33.3%
5014318 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 41.0 4.55e-01 77.3% 88.0%
4084869 213.1.1.14 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_16 0.61 41.0 3.40e-01 70.1% 86.9%
4985017 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 47.0 3.49e-01 84.5% 58.0%
3362578 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 45.0 3.63e-01 79.4% 78.9%
4941251 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 42.0 3.71e-01 74.2% 83.2%
3800585 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.59 40.0 3.39e-01 70.1% 74.5%
3783845 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 53.0 4.90e-01 100.0% 99.2%
3233021 213.1.1.49 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.59 47.0 4.15e-01 85.6% 66.4%
3934185 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 45.0 4.04e-01 83.5% 69.1%
5031468 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.58 43.0 3.63e-01 77.3% 81.2%
3386462 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.58 36.0 3.59e-01 83.5% 58.1%
3690503 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.58 50.0 4.89e-01 96.9% 97.2%
4996269 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.58 48.0 3.64e-01 89.7% 78.7%
3628420 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.57 46.0 3.41e-01 85.6% 44.6%
5069904 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.57 44.0 3.95e-01 83.5% 100.0%
3973778 3982.1.1.0 a+b complex topology › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ 0.57 44.0 4.36e-01 89.7% 79.0%
None 0.57 38.0 3.10e-01 92.8% 36.7%
3310438 5.1.4.145 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop 0.56 41.0 2.60e-01 75.3% 21.3%
4980010 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 42.0 3.59e-01 80.4% 82.4%
4943448 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 36.0 3.35e-01 85.6% 51.7%
3614206 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.56 45.0 3.40e-01 90.7% 91.1%
4261250 213.1.1.2 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N 0.56 46.0 3.68e-01 88.7% 75.3%
4170432 4998.1.1.1 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.55 47.0 4.33e-01 100.0% 72.0%
5067232 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.55 41.0 3.59e-01 79.4% 84.8%
3764049 2004.1.1.442 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.55 41.0 2.91e-01 80.4% 40.7%
4965206 4221.1.1.3 a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PF26008 0.54 35.0 4.09e-01 93.8% 91.4%
4950505 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.54 42.0 3.38e-01 83.5% 75.4%
4941377 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 43.0 3.59e-01 97.9% 50.9%
3717373 213.1.1.73 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › IDM1_C 0.54 42.0 3.42e-01 86.6% 92.2%
1833186 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 45.0 3.94e-01 92.8% 88.6%
3726388 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.53 46.0 4.25e-01 99.0% 75.2%
4444614 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 40.0 4.31e-01 97.9% 98.8%
3839277 241.16.1.1 a+b two layers › Type III secretory system chaperone-like › protein CagD › protein CagD › CagD 0.52 43.0 3.79e-01 100.0% 60.7%
4958640 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.52 41.0 3.42e-01 85.6% 47.7%
3935471 4292.1.1.0 a+b two layers › FlaG-like › FlaG-related › FlaG-related 0.52 36.0 3.87e-01 92.8% 83.5%
4934684 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.52 34.0 3.19e-01 87.6% 54.2%
4007747 3735.1.1.14 beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell 0.52 39.0 2.20e-01 78.4% 14.6%
4309285 3844.2.1.2 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.52 37.0 3.03e-01 75.3% 62.2%
3599323 330.3.1.1 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › RF-1 0.51 41.0 4.29e-01 91.8% 93.3%
4962916 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.51 41.0 3.42e-01 87.6% 78.8%
1877636 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.51 42.0 3.48e-01 90.7% 95.5%
4683341 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.51 39.0 3.10e-01 85.6% 40.0%
4041350 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.50 42.0 3.66e-01 89.7% 89.0%
4229035 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.50 39.0 3.14e-01 84.5% 41.5%
3968198 7503.1.1.1 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG 0.50 44.0 3.53e-01 100.0% 74.5%
D3 high residues 198-247
PDB