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hypothetical_protein_MEL_019

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_019__YP_009094520__Melbournevirus__1560514

Identity

Accession:
YP_009094520 ↗
Protein ID:
hypothetical_protein_MEL_019
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_sp._'Melbournevirus'

TaxID: 1560514

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-109
PDB
Domain cluster: rep: hypothetical_protein_A3303_gp001__YP_009238506__Brazilian_marseillevirus__1813599__D1-88
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 36.0 3.87e-01 75.5% 73.6%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 4.21e-01 76.5% 89.6%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 36.0 4.14e-01 72.5% 96.9%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 35.0 3.64e-01 72.5% 66.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 3.83e-01 72.5% 74.4%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 35.0 3.67e-01 74.5% 69.2%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 36.0 3.92e-01 74.5% 82.1%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.65e-01 74.5% 72.2%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.77e-01 75.5% 75.5%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 4.03e-01 83.3% 90.2%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.55e-01 76.5% 65.7%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.69e-01 74.5% 71.3%
2zfzD00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 33.0 3.66e-01 75.5% 81.0%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.53 37.0 3.79e-01 74.5% 75.2%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 33.0 3.31e-01 74.5% 58.3%
2w61A03 1.20.58.1040 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 38.0 3.61e-01 75.5% 79.2%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.87e-01 73.5% 83.3%
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.51 33.0 3.93e-01 79.4% 97.1%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.51 29.0 3.31e-01 100.0% 74.0%
2biiA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.39e-01 86.3% 96.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3699569 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 41.0 4.46e-01 73.5% 77.6%
3587558 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 39.0 4.42e-01 74.5% 90.0%
5040398 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 36.0 3.70e-01 74.5% 62.1%
3590297 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 39.0 4.01e-01 75.5% 70.0%
4994269 101.1.2.673 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.58 37.0 3.96e-01 74.5% 75.3%
5082317 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.57 35.0 3.73e-01 74.5% 68.9%
3909408 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.57 36.0 4.02e-01 73.5% 86.7%
3225058 101.1.2.566 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.57 46.0 3.25e-01 88.2% 29.2%
3716691 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 4.46e-01 90.2% 100.0%
3216952 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 4.39e-01 77.5% 95.3%
4999183 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 37.0 3.83e-01 76.5% 72.6%
5049424 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 37.0 3.39e-01 75.5% 48.3%
4997405 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.30e-01 74.5% 48.9%
3512683 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 33.0 3.86e-01 73.5% 93.8%
3920426 320.4.1.5 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › Gasdermin_C 0.54 39.0 3.15e-01 76.5% 71.7%
4980480 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 35.0 3.67e-01 74.5% 71.6%
3762392 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.54 38.0 3.05e-01 74.5% 36.5%
3984933 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.54 30.0 3.25e-01 100.0% 63.3%
3234377 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 34.0 3.77e-01 100.0% 81.2%
4951675 101.1.2.530 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.53 35.0 3.57e-01 74.5% 69.0%
5040361 101.1.2.673 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.53 35.0 3.47e-01 75.5% 63.8%
5029366 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 35.0 3.77e-01 77.5% 81.2%
5082865 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 34.0 3.70e-01 75.5% 86.7%
4982782 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 35.0 3.76e-01 77.5% 85.0%
3983904 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 34.0 3.43e-01 76.5% 63.8%
4995927 3715.1.1.0 ↗ a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e 0.51 37.0 3.92e-01 100.0% 85.6%
3477133 101.1.2.186 ↗ alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH 0.51 39.0 3.82e-01 83.3% 86.4%
4027178 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 4.32e-01 98.0% 97.1%
4997268 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.77e-01 74.5% 90.0%
4969831 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.28e-01 74.5% 55.0%
5026346 1075.1.1.3 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.50 40.0 3.03e-01 88.2% 85.5%
3786023 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.50 41.0 3.23e-01 93.1% 42.5%