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hypothetical_protein_MEL_045

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_045__YP_009094546__Melbournevirus__1560514

Identity

Accession:
YP_009094546 ↗
Protein ID:
hypothetical_protein_MEL_045
Kingdom:
euk

Quality

70.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_sp._'Melbournevirus'

TaxID: 1560514

Cluster

View cluster (94 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-117
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.75 69.0 4.91e-01 100.0% 56.8%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.70 60.0 4.42e-01 93.6% 58.2%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.70 48.0 4.63e-01 78.7% 63.2%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.69 58.0 5.72e-01 88.3% 92.9%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.69 64.0 4.07e-01 100.0% 27.8%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.63 55.0 4.31e-01 96.8% 62.0%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.62 40.0 3.62e-01 70.2% 48.8%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 46.0 3.31e-01 81.9% 96.3%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.59 53.0 4.65e-01 96.8% 91.1%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 52.0 4.37e-01 97.9% 69.8%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.58 51.0 3.99e-01 98.9% 62.7%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.58 47.0 4.12e-01 86.2% 69.1%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 48.0 4.21e-01 91.5% 64.6%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.58 50.0 4.83e-01 98.9% 89.0%
3actA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.57 48.0 3.42e-01 91.5% 61.0%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 41.0 3.57e-01 75.5% 53.5%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.57 36.0 3.75e-01 83.0% 67.8%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 47.0 3.26e-01 91.5% 67.4%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.55 47.0 4.24e-01 95.7% 88.1%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 43.0 3.27e-01 90.4% 67.4%
6dnzA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.55 42.0 3.49e-01 84.0% 98.9%
5dstA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.55 41.0 3.44e-01 81.9% 98.3%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.38e-01 97.9% 71.2%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 43.0 2.80e-01 90.4% 66.6%
4h89A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 47.0 3.96e-01 100.0% 97.0%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.52 45.0 3.66e-01 95.7% 54.4%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 3.27e-01 100.0% 36.5%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.52 35.0 3.59e-01 83.0% 70.2%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 42.0 3.15e-01 91.5% 70.4%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 45.0 3.74e-01 100.0% 81.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 4.12e-01 78.7% 96.1%
3eb7A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.50 36.0 2.87e-01 75.5% 74.6%
1w94A00 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.50 39.0 3.36e-01 85.1% 97.4%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 40.0 2.92e-01 90.4% 49.8%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385526 5084.10.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD 0.76 71.0 4.39e-01 100.0% 24.2%
3388794 71.2.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like 0.74 65.0 4.73e-01 94.7% 47.5%
3539857 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 59.0 4.45e-01 96.8% 38.1%
3595544 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.71 63.0 4.33e-01 94.7% 37.4%
4285799 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.70 64.0 3.90e-01 100.0% 25.1%
3968293 71.2.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 0.69 60.0 4.56e-01 93.6% 44.3%
4188949 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.69 63.0 3.86e-01 100.0% 30.0%
3490071 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.69 64.0 4.66e-01 100.0% 42.1%
3596663 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.68 57.0 4.09e-01 100.0% 31.3%
4269370 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.68 63.0 3.76e-01 100.0% 32.7%
3827592 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.68 58.0 4.85e-01 92.6% 57.0%
3627240 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.67 62.0 4.27e-01 100.0% 32.7%
3512269 79.1.1.16 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 0.67 52.0 5.33e-01 83.0% 85.6%
3667729 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.66 58.0 4.11e-01 94.7% 33.8%
3581297 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.66 58.0 4.47e-01 100.0% 42.8%
3512069 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.66 59.0 4.57e-01 100.0% 46.0%
2392665 5084.1.1.12 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Porin_7 0.65 57.0 5.29e-01 94.7% 96.6%
3293131 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.65 57.0 4.18e-01 96.8% 69.4%
3935761 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.64 56.0 3.96e-01 94.7% 32.2%
3706756 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 58.0 4.11e-01 100.0% 33.8%
3385986 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.64 55.0 4.38e-01 96.8% 51.5%
3824851 5084.5.1.43 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF30985 0.62 56.0 4.57e-01 96.8% 58.2%
3416878 77.3.1.3 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.62 54.0 4.39e-01 97.9% 53.5%
3813090 9.13.1.1 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent 0.60 51.0 4.31e-01 91.5% 60.0%
168139 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.59 46.0 3.25e-01 81.9% 92.2%
4975453 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.59 45.0 3.72e-01 98.9% 45.0%
5046573 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.59 46.0 3.90e-01 100.0% 49.4%
3691111 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 40.0 3.30e-01 72.3% 45.7%
2997059 9.13.1.5 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.58 47.0 4.12e-01 86.2% 66.2%
3167073 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 45.0 3.74e-01 84.0% 63.7%
4998774 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.56 50.0 3.12e-01 94.7% 25.6%
3501545 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.56 49.0 4.05e-01 97.9% 68.2%
4065140 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 49.0 3.54e-01 100.0% 68.4%
3487487 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.54 45.0 3.56e-01 91.5% 49.5%
3481201 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.54 46.0 3.73e-01 98.9% 50.8%
4982498 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 49.0 2.96e-01 100.0% 19.5%
5011158 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.53 45.0 3.95e-01 93.6% 63.2%
4354418 9.1.1.16 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 42.0 2.52e-01 86.2% 21.6%
4984404 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.53 45.0 3.86e-01 93.6% 62.8%
3228597 213.1.1.49 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.52 46.0 4.17e-01 100.0% 95.4%
4346133 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 41.0 3.62e-01 87.2% 96.5%
D2 medium residues 118-208
PDB