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hypothetical_protein_MEL_051

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_051__YP_009094552__Melbournevirus__1560514

Identity

Accession:
YP_009094552 ↗
Protein ID:
hypothetical_protein_MEL_051
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_sp._'Melbournevirus'

TaxID: 1560514

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-104
PDB
D2 medium residues 105-161
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jrjA02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.65 37.0 3.72e-01 87.7% 52.5%
6wm6A01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.60 50.0 3.41e-01 98.2% 50.4%
3lvuB00 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.59 47.0 3.21e-01 96.5% 54.5%
1bqcA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 41.0 2.66e-01 80.7% 86.4%
3pamB00 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.56 45.0 3.10e-01 100.0% 52.8%
1j5xA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 42.0 3.19e-01 100.0% 33.3%
3pztB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 45.0 2.87e-01 94.7% 39.2%
7atrA01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.54 43.0 2.97e-01 98.2% 54.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4250277 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.66 37.0 3.48e-01 86.0% 42.9%
4568160 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.65 37.0 3.59e-01 86.0% 46.9%
4100290 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.61 35.0 3.18e-01 86.0% 37.5%
2774848 7523.1.1.3 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.60 50.0 3.42e-01 98.2% 50.7%
3387841 7577.1.1.6 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.57 46.0 3.02e-01 100.0% 31.0%
4961706 7523.1.1.3 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.55 45.0 3.01e-01 100.0% 46.4%
4961408 7523.1.1.3 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.55 45.0 3.06e-01 100.0% 44.5%
3973137 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 43.0 2.96e-01 100.0% 52.7%
3167962 4329.1.1.1 ↗ a+b complex topology › ORC1-binding domain › ORC1-binding domain › ORC1-binding domain › Sir1 0.53 43.0 3.38e-01 91.2% 93.6%
4014174 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 42.0 3.10e-01 100.0% 39.4%
119396 375.9.1.1 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger in leader protease Nsp1alpha › Zinc finger in leader protease Nsp1alpha › Zf-Nsp1alpha 0.51 32.0 3.34e-01 73.7% 69.2%