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hypothetical_protein_MEL_092

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_092__YP_009094593__Melbournevirus__1560514

Identity

Accession:
YP_009094593 ↗
Protein ID:
hypothetical_protein_MEL_092
Kingdom:
euk

Quality

78.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-86
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.71 55.0 4.65e-01 82.9% 68.9%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.71 63.0 5.16e-01 100.0% 80.3%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.66 41.0 3.60e-01 84.1% 42.0%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 53.0 4.36e-01 86.6% 77.2%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 55.0 4.59e-01 91.5% 82.9%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.65 57.0 4.61e-01 97.6% 75.2%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 50.0 3.44e-01 82.9% 42.6%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.63 50.0 3.88e-01 86.6% 66.8%
4h63Q04 3.90.1150.120 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.63 54.0 4.93e-01 100.0% 83.6%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 53.0 4.10e-01 93.9% 63.8%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 4.20e-01 87.8% 83.0%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 4.25e-01 87.8% 76.3%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.62 45.0 4.47e-01 93.9% 75.0%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 47.0 3.94e-01 81.7% 92.1%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.60 42.0 4.43e-01 72.0% 90.1%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.60 45.0 3.45e-01 79.3% 91.3%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 37.0 3.21e-01 84.1% 38.3%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 52.0 4.02e-01 96.3% 66.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.60 50.0 4.87e-01 97.6% 83.1%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.59 45.0 3.06e-01 81.7% 93.4%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 51.0 4.72e-01 97.6% 94.2%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.58 42.0 4.67e-01 96.3% 98.4%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.58 40.0 3.12e-01 73.2% 85.2%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 50.0 4.67e-01 98.8% 94.2%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 37.0 3.38e-01 89.0% 48.2%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 37.0 3.97e-01 73.2% 77.5%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 50.0 3.92e-01 97.6% 62.0%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.60e-01 73.2% 87.5%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.56 49.0 3.82e-01 97.6% 66.1%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.55 48.0 4.10e-01 97.6% 83.7%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.55 48.0 4.57e-01 98.8% 81.2%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 49.0 4.53e-01 96.3% 92.2%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.83e-01 91.5% 78.7%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 39.0 3.98e-01 76.8% 88.7%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 39.0 3.41e-01 78.0% 67.4%
7vt9A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 37.0 3.98e-01 74.4% 100.0%
4qq1C03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.52 35.0 3.43e-01 81.7% 63.6%
1gjwA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 39.0 4.18e-01 90.2% 100.0%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 37.0 3.78e-01 78.0% 100.0%
2wc7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 39.0 3.96e-01 85.4% 100.0%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.50 35.0 3.10e-01 74.4% 58.8%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 38.0 3.66e-01 86.6% 92.2%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 38.0 3.66e-01 82.9% 97.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5014277 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.75 48.0 4.81e-01 73.2% 63.5%
3547494 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.72 56.0 4.91e-01 82.9% 83.3%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.68 55.0 4.64e-01 96.3% 52.6%
4234296 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.68 53.0 4.43e-01 82.9% 86.4%
3268550 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.68 52.0 3.89e-01 82.9% 77.0%
3973592 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.67 52.0 3.94e-01 82.9% 78.4%
4679975 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 50.0 3.24e-01 80.5% 39.7%
4940099 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 50.0 3.21e-01 80.5% 32.9%
5048803 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 51.0 3.27e-01 81.7% 34.0%
4229031 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.66 50.0 3.22e-01 80.5% 39.7%
4350765 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 50.0 3.18e-01 80.5% 82.6%
3959610 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 52.0 4.41e-01 85.4% 88.7%
None 0.65 54.0 3.40e-01 90.2% 19.3%
3856809 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.65 56.0 5.51e-01 98.8% 92.2%
5001593 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 46.0 3.80e-01 73.2% 47.1%
4018988 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.65 50.0 4.25e-01 84.1% 87.1%
4231809 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 50.0 3.08e-01 82.9% 25.9%
5028909 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.64 49.0 3.01e-01 81.7% 25.9%
4670897 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.64 56.0 4.69e-01 97.6% 85.7%
3239519 4099.1.1.29 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 0.63 52.0 4.39e-01 92.7% 87.6%
5057328 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.63 49.0 3.08e-01 82.9% 27.3%
4228206 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.63 42.0 4.27e-01 73.2% 70.0%
1005590 3561.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.63 55.0 3.55e-01 100.0% 22.7%
3239880 4099.1.1.29 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 0.63 53.0 4.56e-01 95.1% 97.0%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.63 52.0 4.73e-01 90.2% 95.5%
3587042 331.3.1.32 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3284 0.62 50.0 4.26e-01 86.6% 84.4%
3962450 9.27.1.0 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.62 50.0 4.59e-01 86.6% 96.2%
3663339 331.4.1.7 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 0.62 52.0 4.18e-01 93.9% 48.4%
3289567 881.1.1.15 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.61 50.0 4.23e-01 87.8% 94.1%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 45.0 4.38e-01 78.0% 96.7%
5014685 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 41.0 4.49e-01 96.3% 87.7%
3912111 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 51.0 4.58e-01 95.1% 83.5%
3456597 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.60 53.0 4.14e-01 96.3% 63.7%
3870987 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.59 41.0 3.98e-01 73.2% 95.8%
3784810 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.59 51.0 4.91e-01 100.0% 98.9%
3927891 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 42.0 3.61e-01 74.4% 77.7%
4974130 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.59 52.0 3.65e-01 98.8% 63.5%
3812180 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.59 45.0 3.29e-01 82.9% 84.7%
3935896 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 50.0 4.29e-01 96.3% 59.2%
3615896 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.58 51.0 3.87e-01 97.6% 67.0%
4602126 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 51.0 4.66e-01 98.8% 88.2%
3492352 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.58 50.0 4.69e-01 100.0% 90.5%
3910253 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 51.0 4.73e-01 100.0% 93.3%
3262513 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 50.0 4.52e-01 100.0% 80.8%
3752441 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 50.0 4.49e-01 100.0% 84.2%
4948155 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 3.37e-01 89.0% 43.8%
3236186 922.1.1.0 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat 0.58 44.0 4.25e-01 82.9% 71.6%
5046787 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 44.0 3.08e-01 81.7% 84.2%
3481105 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 50.0 3.46e-01 100.0% 86.6%
3972685 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 48.0 4.04e-01 97.6% 70.7%
3416606 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.56 45.0 3.44e-01 87.8% 93.3%
3415161 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.56 47.0 3.38e-01 97.6% 34.5%
5050910 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 35.0 3.17e-01 82.9% 44.3%
3284176 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 48.0 4.17e-01 92.7% 71.7%
5051418 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.56 44.0 3.71e-01 84.1% 76.3%
3778939 59.1.1.15 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › ELL 0.56 39.0 3.73e-01 73.2% 92.6%
3411657 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.55 48.0 3.34e-01 100.0% 86.0%
3953302 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.55 47.0 4.38e-01 93.9% 76.9%
3981185 241.1.1.25 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 0.55 48.0 4.33e-01 100.0% 92.2%
4323155 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.55 42.0 4.00e-01 90.2% 69.0%
3853974 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.54 42.0 3.98e-01 84.1% 96.0%
3843366 9.2.1.9 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Pep_M12B_propep 0.54 42.0 3.94e-01 86.6% 100.0%
3913030 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.54 42.0 3.94e-01 86.6% 99.0%
3590243 6044.1.1.1 a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like › DUF1827 0.54 47.0 4.37e-01 100.0% 94.3%
4259150 295.1.1.46 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › WapI 0.52 39.0 3.43e-01 84.1% 91.1%
3859372 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.52 42.0 3.89e-01 90.2% 89.5%
5064859 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 38.0 2.71e-01 78.0% 88.3%
5053431 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.50 44.0 3.58e-01 98.8% 51.6%
D2 medium residues 90-147
PDB
Domain cluster: representative