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hypothetical_protein_MEL_209

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_209__YP_009094710__Melbournevirus__1560514

Identity

Accession:
YP_009094710 ↗
Protein ID:
hypothetical_protein_MEL_209
Kingdom:
euk

Quality

74.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_sp._'Melbournevirus'

TaxID: 1560514

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-154
PDB
Domain cluster: rep: putative_TATA-box_binding_protein__YP_009173312__Chrysochromulina_ericina_virus__455364__D49-222
D2 high residues 158-206_242-288
PDB
Domain cluster: rep: pB263R__YP_009702334__African_swine_fever_virus__10497__D4-18_159-258
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.84 66.0 6.69e-01 97.9% 84.9%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.82 62.0 6.54e-01 92.7% 88.5%
1cdwA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.81 63.0 6.67e-01 94.8% 91.9%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.69 57.0 5.91e-01 89.6% 98.9%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.69 55.0 5.70e-01 93.8% 93.3%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.68 48.0 5.38e-01 90.6% 98.6%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 55.0 4.89e-01 99.0% 99.3%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 53.0 4.61e-01 95.8% 94.7%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 54.0 4.62e-01 100.0% 95.8%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.62 53.0 5.01e-01 94.8% 92.1%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 50.0 4.02e-01 90.6% 87.4%
1nrkA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.60 47.0 4.91e-01 96.9% 93.1%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 4.28e-01 94.8% 93.7%
4paaA04 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.59 46.0 4.37e-01 96.9% 70.9%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 49.0 3.94e-01 96.9% 76.4%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.57 45.0 3.14e-01 96.9% 24.6%
1v5vA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.57 47.0 4.77e-01 97.9% 95.7%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 41.0 3.52e-01 77.1% 78.8%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 25.0 3.03e-01 71.9% 60.6%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 26.0 3.14e-01 71.9% 63.6%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.55 41.0 2.81e-01 81.2% 93.1%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 34.0 3.53e-01 77.1% 68.6%
1fnoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 47.0 4.56e-01 96.9% 92.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.54 43.0 3.84e-01 88.5% 98.6%
2a2lC00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.54 43.0 3.80e-01 87.5% 95.8%
3bf4A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 4.46e-01 99.0% 90.9%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.52 45.0 4.39e-01 94.8% 86.5%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 43.0 3.47e-01 93.8% 89.9%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 37.0 3.12e-01 76.0% 80.0%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.50e-01 74.0% 94.5%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.40e-01 74.0% 97.4%
4ud8A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.51 45.0 3.64e-01 99.0% 52.2%
1v5mA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 35.0 3.18e-01 72.9% 89.7%
1dceA02 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.51 36.0 3.57e-01 91.7% 69.9%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 35.0 3.47e-01 71.9% 97.1%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.35e-01 79.2% 79.6%
8f66A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.50 43.0 3.42e-01 95.8% 84.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 32.0 3.74e-01 84.4% 95.5%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.56e-01 79.2% 95.7%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3403222 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.86 66.0 5.70e-01 93.8% 55.0%
5041453 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.84 65.0 6.84e-01 91.7% 90.6%
3262123 331.1.1.12 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 0.83 60.0 4.56e-01 99.0% 34.3%
3601320 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.83 72.0 7.13e-01 91.7% 94.0%
4028814 604.1.1.135 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 0.83 64.0 4.68e-01 93.8% 32.5%
3401778 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.83 66.0 6.69e-01 99.0% 85.3%
5000457 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.81 71.0 6.65e-01 93.8% 91.3%
4314842 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.81 66.0 6.40e-01 96.9% 79.0%
3511083 4121.1.1.6 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › DUF155 0.81 65.0 4.73e-01 99.0% 33.5%
5002867 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.81 59.0 6.14e-01 90.6% 82.2%
5033458 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.80 63.0 6.50e-01 93.8% 87.8%
3887886 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.80 67.0 4.86e-01 99.0% 34.7%
3598831 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.80 63.0 6.24e-01 94.8% 80.0%
5080218 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.80 59.0 6.43e-01 92.7% 93.8%
3755055 331.1.1.12 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 0.79 66.0 5.83e-01 99.0% 63.0%
3209971 604.1.1.135 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 0.79 64.0 4.46e-01 99.0% 28.1%
4966809 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.78 56.0 6.08e-01 89.6% 90.0%
3717759 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.78 68.0 6.22e-01 94.8% 100.0%
4981525 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.77 59.0 6.36e-01 93.8% 97.5%
3194381 331.1.1.12 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 0.77 64.0 5.66e-01 99.0% 63.0%
3413735 3435.1.1.6 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF155 0.77 67.0 5.58e-01 99.0% 57.4%
3494489 331.9.1.12 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › BBS2_pf 0.72 56.0 5.41e-01 94.8% 72.7%
None — 0.71 57.0 4.29e-01 94.8% 36.4%
4964235 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.71 63.0 4.58e-01 97.9% 52.7%
3801875 604.1.1.135 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 0.69 61.0 4.40e-01 99.0% 35.7%
3425427 4121.1.1.6 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › DUF155 0.69 61.0 4.38e-01 99.0% 35.7%
3182505 331.1.1.13 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.68 60.0 5.93e-01 96.9% 99.0%
3358939 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.67 59.0 4.26e-01 99.0% 35.4%
3817626 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.66 47.0 3.76e-01 72.9% 49.4%
3512817 304.107.1.10 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf 0.66 53.0 4.93e-01 97.9% 68.0%
3243115 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.66 56.0 4.34e-01 95.8% 72.4%
4004064 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 58.0 5.20e-01 100.0% 88.9%
3484746 304.107.1.10 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf 0.62 54.0 5.23e-01 97.9% 91.8%
4025336 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.60 47.0 3.44e-01 96.9% 29.0%
4113463 898.1.1.1 ↗ a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 0.60 45.0 4.21e-01 96.9% 64.2%
3588252 6043.1.1.0 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like 0.59 36.0 4.26e-01 72.9% 90.8%
5054384 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 40.0 4.41e-01 80.2% 100.0%
3286425 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 39.0 4.03e-01 71.9% 86.7%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 3.82e-01 85.4% 73.7%
3663850 708.1.1.8 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 0.54 39.0 3.96e-01 78.1% 76.8%
3630631 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.53 40.0 2.45e-01 83.3% 31.4%
3928729 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.52 37.0 2.95e-01 75.0% 86.1%
3512851 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.50e-01 80.2% 94.8%
4996140 304.39.1.1 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.51 44.0 4.23e-01 96.9% 83.6%
4050317 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 36.0 3.31e-01 72.9% 88.0%
3496244 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.34e-01 78.1% 85.7%
3789602 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 35.0 3.26e-01 72.9% 85.6%
3924112 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.50 43.0 4.17e-01 93.8% 88.2%