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hypothetical_protein_MEL_348

Euk-Vir

Melbournevirus

hypothetical_protein_MEL_348__YP_009094849__Melbournevirus__1560514

Identity

Accession:
YP_009094849 ↗
Protein ID:
hypothetical_protein_MEL_348
Kingdom:
euk

Quality

79.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_sp._'Melbournevirus'

TaxID: 1560514

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-67
PDB
Domain cluster: rep: hypothetical_protein_MEL_058__YP_009094559__Melbournevirus__1560514__D13-65
D2 medium residues 68-121
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.81e-01 94.4% 77.3%
4ja3A02 1.10.286.90 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › MFS transporter, transmembrane helix TM10b 0.71 52.0 5.58e-01 79.6% 100.0%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.69 52.0 5.04e-01 87.0% 73.0%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.68 43.0 4.10e-01 81.5% 54.7%
4zqeA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.68 46.0 3.81e-01 70.4% 40.6%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 55.0 5.22e-01 96.3% 87.9%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 5.05e-01 90.7% 100.0%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.65 53.0 4.09e-01 94.4% 62.7%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.63 50.0 4.60e-01 98.1% 66.2%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 45.0 4.09e-01 75.9% 81.7%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 51.0 4.30e-01 98.1% 53.1%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 44.0 3.35e-01 83.3% 33.1%
3d5lA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.51e-01 83.3% 88.5%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 49.0 4.71e-01 100.0% 85.3%
3qdnA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 43.0 3.73e-01 94.4% 50.0%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.59 52.0 3.81e-01 100.0% 62.7%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 45.0 4.46e-01 90.7% 79.7%
1iq0A03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.56 49.0 3.86e-01 98.1% 75.9%
4g9qA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.56 48.0 3.20e-01 100.0% 24.8%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 44.0 3.86e-01 90.7% 72.1%
1gs0A01 1.20.142.10 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain 0.54 47.0 3.47e-01 94.4% 65.1%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 45.0 3.81e-01 98.1% 74.2%
2xpiD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 41.0 2.44e-01 94.4% 29.2%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063967 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 72.0 6.93e-01 96.3% 83.3%
4995680 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.73 62.0 6.08e-01 98.1% 98.3%
3241028 101.1.2.649 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28730 0.72 59.0 5.01e-01 88.9% 65.9%
2813092 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.69 62.0 3.92e-01 100.0% 91.0%
3563871 603.1.1.121 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30821 0.69 56.0 4.39e-01 90.7% 74.8%
5044963 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 56.0 4.17e-01 92.6% 36.4%
4017411 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.63 47.0 3.35e-01 79.6% 32.0%
3700131 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 52.0 5.07e-01 98.1% 96.7%
3876892 375.2.1.0 ↗ few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like 0.59 44.0 3.93e-01 87.0% 55.0%
3574716 109.4.1.1312 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30475 0.56 43.0 3.71e-01 90.7% 50.5%
4872582 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 4.34e-01 92.6% 93.1%
3944648 109.4.1.200 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 0.55 46.0 3.65e-01 92.6% 76.4%
3948391 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 46.0 3.77e-01 100.0% 93.6%
3700618 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 47.0 3.88e-01 100.0% 68.0%
3459243 3236.1.1.3 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Mem_trans 0.52 46.0 2.82e-01 100.0% 26.2%
3621852 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.54e-01 98.1% 84.2%