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hypothetical_protein_MIMI_gp0005
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0005__YP_003986479__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986479 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0005
- Kingdom:
- euk
Quality
71.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-82
D2
high
residues 125-264
D3
high
residues 288-389
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 22.0 | 2.60e-04 | 95.1% | 67.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 40.0 | 4.55e-01 | 72.5% | 81.6% |
| 3rjaA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.64 | 54.0 | 4.14e-01 | 92.2% | 76.0% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.64 | 52.0 | 5.45e-01 | 93.1% | 96.7% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.56 | 42.0 | 4.46e-01 | 98.0% | 87.8% |
| 3dkxA01 | 3.40.1310.30 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.56 | 47.0 | 4.32e-01 | 93.1% | 91.0% |
| 1nlfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 44.0 | 3.38e-01 | 86.3% | 72.8% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 44.0 | 4.71e-01 | 98.0% | 98.9% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.55 | 33.0 | 3.44e-01 | 100.0% | 63.5% |
| 7vxrA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 37.0 | 3.78e-01 | 86.3% | 77.6% |
| 8g4uA02 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.62e-01 | 84.3% | 82.1% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.50 | 40.0 | 4.11e-01 | 93.1% | 89.6% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4016088 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.74 | 59.0 | 5.90e-01 | 98.0% | 82.9% |
| 3989300 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.70 | 58.0 | 5.64e-01 | 100.0% | 80.9% |
| 3389034 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 34.0 | 4.23e-01 | 93.1% | 90.9% |
| 3252771 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.64 | 49.0 | 5.26e-01 | 94.1% | 100.0% |
| 5001356 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.61 | 45.0 | 2.93e-01 | 77.5% | 35.6% |
| 5043748 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.59 | 30.0 | 3.42e-01 | 100.0% | 64.0% |
| 3767943 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.59 | 50.0 | 4.04e-01 | 92.2% | 64.1% |
| 5082825 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 40.0 | 3.92e-01 | 70.6% | 70.9% |
| 4220646 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.58 | 40.0 | 4.03e-01 | 70.6% | 76.0% |
| 4460922 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.58 | 31.0 | 3.44e-01 | 70.6% | 65.0% |
| 3398922 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.58 | 40.0 | 4.20e-01 | 70.6% | 86.7% |
| 4333414 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.57 | 39.0 | 4.11e-01 | 70.6% | 84.0% |
| 4969014 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.57 | 41.0 | 4.52e-01 | 75.5% | 98.8% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.56 | 40.0 | 4.25e-01 | 74.5% | 86.7% |
| 4939726 | 212.1.1.17 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV | 0.56 | 39.0 | 2.95e-01 | 70.6% | 31.8% |
| 3954572 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.56 | 47.0 | 3.57e-01 | 92.2% | 58.8% |
| 4963170 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.56 | 39.0 | 4.16e-01 | 72.5% | 87.8% |
| 5069226 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.56 | 43.0 | 2.98e-01 | 81.4% | 26.1% |
| 3804909 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 46.0 | 3.55e-01 | 92.2% | 64.9% |
| 4926895 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 41.0 | 4.27e-01 | 81.4% | 85.3% |
| 4618631 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 39.0 | 4.20e-01 | 75.5% | 100.0% |
| 4438218 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 41.0 | 4.02e-01 | 80.4% | 98.2% |
| 3222531 | 11.1.1.13 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Motile_Sperm | 0.54 | 35.0 | 3.24e-01 | 79.4% | 51.5% |
| 3503254 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.53 | 41.0 | 4.48e-01 | 98.0% | 98.8% |
| 4927517 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 41.0 | 4.25e-01 | 81.4% | 87.4% |
| 4202669 | 304.110.1.4 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N | 0.51 | 42.0 | 4.38e-01 | 99.0% | 98.9% |
| 5038487 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.51 | 40.0 | 4.21e-01 | 91.2% | 94.4% |
| 3737742 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 31.0 | 3.10e-01 | 100.0% | 56.0% |