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hypothetical_protein_MIMI_gp0013
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0013__YP_003986487__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986487 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0013
- Kingdom:
- euk
Quality
61.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-77
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ghfA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 48.0 | 4.08e-01 | 100.0% | 52.8% |
| 2b0vA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 48.0 | 3.53e-01 | 100.0% | 54.7% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 34.0 | 2.85e-01 | 100.0% | 32.6% |
| 1vk6A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 47.0 | 3.57e-01 | 100.0% | 58.0% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 46.0 | 3.51e-01 | 100.0% | 57.8% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.54 | 44.0 | 3.74e-01 | 100.0% | 90.5% |
| 3do6A03 | 3.10.410.10 | Alpha Beta › Roll › Formyltetrahydrofolate synthetase; domain 3 › Formyltetrahydrofolate synthetase, domain 3 | 0.52 | 40.0 | 3.35e-01 | 100.0% | 48.3% |
| 3l50A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 38.0 | 2.92e-01 | 90.0% | 60.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3819971 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 51.0 | 3.70e-01 | 100.0% | 70.0% |
| 4144572 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.61 | 53.0 | 4.52e-01 | 100.0% | 71.8% |
| 3390160 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.59 | 51.0 | 4.74e-01 | 100.0% | 76.9% |
| 3395303 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.57 | 35.0 | 3.13e-01 | 100.0% | 40.0% |
| 3788875 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.57 | 46.0 | 4.18e-01 | 100.0% | 73.3% |
| 4403517 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.56 | 36.0 | 3.53e-01 | 100.0% | 60.0% |
| 3852128 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.56 | 48.0 | 4.08e-01 | 100.0% | 58.8% |
| 4438870 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.55 | 45.0 | 3.67e-01 | 100.0% | 66.4% |
| 4852063 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 39.0 | 3.28e-01 | 78.0% | 85.4% |
| 3573551 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.54 | 47.0 | 3.96e-01 | 100.0% | 58.8% |
| 4995785 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.54 | 42.0 | 4.20e-01 | 100.0% | 98.2% |
| 4542419 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.54 | 44.0 | 3.50e-01 | 100.0% | 67.5% |
| 4383498 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.53 | 43.0 | 3.44e-01 | 100.0% | 65.8% |
| 3514580 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.53 | 33.0 | 3.29e-01 | 100.0% | 58.2% |
| 4669977 | 239.2.1.0 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like | 0.53 | 43.0 | 3.51e-01 | 100.0% | 71.8% |
| 4947178 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.53 | 43.0 | 3.33e-01 | 100.0% | 63.8% |
| 4928227 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.52 | 43.0 | 3.91e-01 | 100.0% | 98.6% |
| 3280986 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.51 | 44.0 | 3.63e-01 | 100.0% | 61.1% |
| 4459241 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 41.0 | 3.27e-01 | 100.0% | 63.2% |
| 3465532 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 31.0 | 2.89e-01 | 100.0% | 41.4% |
| 4261665 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.50 | 40.0 | 3.44e-01 | 100.0% | 75.8% |