←Back to structures
hypothetical_protein_MIMI_gp0060
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0060__YP_003986534__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986534 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0060
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-116
Domain cluster:
rep: hypothetical_protein_pdul_cds_674__YP_008319493__Pandoravirus_dulcis__1349409__D48-124
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 32.0 | 3.86e-01 | 93.2% | 73.9% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 29.0 | 4.03e-01 | 89.3% | 97.9% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 34.0 | 4.02e-01 | 98.1% | 86.8% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 31.0 | 3.62e-01 | 75.7% | 72.6% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 4.11e-01 | 95.1% | 98.3% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 29.0 | 3.54e-01 | 94.2% | 77.3% |
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.56 | 28.0 | 3.48e-01 | 94.2% | 78.7% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 3.48e-01 | 94.2% | 68.7% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 29.0 | 3.27e-01 | 93.2% | 65.0% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 36.0 | 2.97e-01 | 99.0% | 37.2% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 32.0 | 3.82e-01 | 94.2% | 93.8% |
| 2d7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 28.0 | 3.16e-01 | 94.2% | 66.2% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 28.0 | 2.92e-01 | 92.2% | 54.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 26.0 | 3.89e-01 | 70.9% | 62.0% |
| 171891 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.66 | 34.0 | 4.44e-01 | 83.5% | 92.7% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.62 | 33.0 | 3.94e-01 | 88.3% | 78.5% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.60 | 34.0 | 3.82e-01 | 85.4% | 71.2% |
| 3517377 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 34.0 | 3.68e-01 | 75.7% | 65.9% |
| 3877478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 34.0 | 3.50e-01 | 75.7% | 58.0% |
| 3913687 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 33.0 | 3.52e-01 | 74.8% | 64.4% |
| 5030339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 28.0 | 2.95e-01 | 92.2% | 49.5% |
| 4266110 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.56 | 30.0 | 3.52e-01 | 90.3% | 74.3% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 29.0 | 3.66e-01 | 86.4% | 85.0% |
| 4119693 | 6064.1.1.0 ↗ | few secondary structure elements › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 | 0.56 | 29.0 | 3.81e-01 | 91.3% | 100.0% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 29.0 | 3.70e-01 | 100.0% | 90.9% |
| 5027750 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 29.0 | 3.74e-01 | 83.5% | 96.4% |
| 3625817 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.54 | 33.0 | 3.67e-01 | 99.0% | 78.8% |
| 3494260 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.53 | 28.0 | 2.96e-01 | 93.2% | 53.7% |
| 3514191 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.65e-01 | 92.2% | 71.0% |
| 3479342 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.52 | 27.0 | 2.83e-01 | 93.2% | 51.0% |
| 3230503 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 39.0 | 3.28e-01 | 100.0% | 45.8% |
| 3266485 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 37.0 | 3.40e-01 | 95.1% | 57.9% |
| 3509523 | 220.1.1.167 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29707 | 0.50 | 36.0 | 3.28e-01 | 94.2% | 55.7% |