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hypothetical_protein_MIMI_gp0133
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0133__YP_003986607__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986607 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0133
- Kingdom:
- euk
Quality
58.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 486-562
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 50.0 | 4.84e-01 | 100.0% | 83.7% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.55 | 40.0 | 3.15e-01 | 77.9% | 76.3% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 39.0 | 3.24e-01 | 98.7% | 43.8% |
| 2vy0B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 2.94e-01 | 89.6% | 80.6% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.04e-01 | 70.1% | 76.9% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 42.0 | 2.96e-01 | 89.6% | 84.8% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 36.0 | 3.06e-01 | 74.0% | 73.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060936 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.62 | 31.0 | 2.94e-01 | 74.0% | 38.9% |
| 3312418 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 45.0 | 3.04e-01 | 79.2% | 65.5% |
| 5074928 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 30.0 | 3.25e-01 | 74.0% | 63.1% |
| 3359554 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.54 | 46.0 | 3.24e-01 | 94.8% | 69.8% |
| 3502069 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 43.0 | 3.51e-01 | 96.1% | 58.7% |
| 3888662 | 5.1.4.546 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CFAP43_N | 0.52 | 43.0 | 2.83e-01 | 92.2% | 49.3% |
| 4961801 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.52 | 36.0 | 2.66e-01 | 72.7% | 70.7% |
| 3707066 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.52 | 42.0 | 3.12e-01 | 92.2% | 69.3% |
| 4848998 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 43.0 | 2.88e-01 | 97.4% | 78.3% |
D2
medium
residues 335-429
Domain cluster:
rep: S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00367__D3-101