hypothetical_protein_MIMI_gp0148

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0148__YP_003986622__Acanthamoeba_polyphaga_mimivirus__212035

Identity

69.5 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

View cluster (2 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 41-136

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3frrA00	1.20.1260.60	Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1	0.63	55.0	4.52e-01	99.0%	74.7%
2p1aB01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.56	50.0	4.35e-01	100.0%	89.7%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3985992	5069.1.3.10 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ATP-synt_I	0.75	60.0	6.17e-01	95.8%	90.0%
3402327	3755.3.1.324 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725	0.74	51.0	4.22e-01	71.9%	80.6%
3725890	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.72	66.0	6.00e-01	100.0%	83.2%
3926303	611.8.1.0 ↗	alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1	0.72	66.0	5.49e-01	100.0%	71.9%
3884532	1203.1.2.1 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2	0.62	54.0	3.87e-01	95.8%	52.7%
2876662	375.10.1.1 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol	0.55	38.0	3.59e-01	71.9%	68.9%
4136948	129.1.1.15 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer	0.54	39.0	3.86e-01	97.9%	71.4%

D2 medium residues 137-226

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19165.6 best	DUF5847	74.8	9.40e-21	97.8%	16.5%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ot4A00	3.40.50.850	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like	0.58	39.0	3.13e-01	70.0%	37.4%
4eziA02	1.10.260.160	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) ›	0.57	39.0	3.89e-01	84.4%	67.7%
3tovA01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.53	38.0	3.17e-01	100.0%	41.7%
4is2A00	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.53	44.0	3.38e-01	93.3%	88.3%
2oezA02	1.10.3900.10	Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like	0.51	37.0	3.14e-01	76.7%	87.1%
2jexA01	1.10.287.30	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1	0.51	34.0	3.42e-01	70.0%	95.8%
2bd0A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.50	40.0	3.11e-01	92.2%	89.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4017112	2003.1.1.3 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short	0.59	46.0	3.26e-01	85.6%	69.8%
5045924	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.54	43.0	3.44e-01	91.1%	90.0%