←Back to structures

hypothetical_protein_MIMI_gp0204

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0204__YP_003986678__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986678 ↗
Protein ID:
hypothetical_protein_MIMI_gp0204
Kingdom:
euk

Quality

81.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-74
PDB
Domain cluster: rep: hypothetical_protein_MIMI_gp0755__YP_003987225__Acanthamoeba_polyphaga_mimivirus__212035__D10-72
D2 medium residues 75-134
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cpgA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.63 44.0 4.29e-01 76.7% 69.6%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 41.0 4.00e-01 73.3% 69.1%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.50 33.0 3.32e-01 70.0% 86.2%
D3 medium residues 135-258
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o2tA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 65.0 4.86e-01 100.0% 49.7%
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 65.0 4.66e-01 100.0% 39.8%
2lsgA00 1.20.58.1280 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain 0.68 51.0 5.58e-01 95.2% 100.0%
5bqnA02 1.20.1120.10 Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" 0.68 50.0 3.58e-01 76.6% 57.3%
1oxjA02 1.25.40.170 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain 0.66 55.0 5.79e-01 96.0% 100.0%
4ffbC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.66 59.0 4.74e-01 99.2% 51.5%
1yz5B00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.66 60.0 4.90e-01 100.0% 64.2%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.64 44.0 3.81e-01 70.2% 92.4%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 57.0 4.84e-01 100.0% 62.1%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.63 54.0 4.84e-01 92.7% 94.8%
3sbtB02 1.25.40.550 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Aar2, C-terminal domain-like 0.63 53.0 4.87e-01 97.6% 70.7%
4cb8A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 56.0 3.78e-01 100.0% 27.9%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 56.0 4.39e-01 98.4% 59.9%
4crwA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 56.0 4.61e-01 100.0% 58.8%
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.61 39.0 4.56e-01 70.2% 90.9%
1sz9C00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 53.0 5.10e-01 98.4% 84.3%
4ui9J00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 46.0 3.07e-01 100.0% 19.6%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 36.0 4.35e-01 70.2% 96.0%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 53.0 4.48e-01 98.4% 57.8%
7zb5E01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.61 55.0 4.15e-01 100.0% 51.4%
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 52.0 5.12e-01 96.8% 88.5%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 55.0 4.44e-01 100.0% 63.2%
1vdyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 52.0 5.06e-01 96.8% 87.9%
2lahA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 47.0 4.37e-01 98.4% 65.6%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 54.0 4.67e-01 100.0% 68.0%
6i2mB02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.59 46.0 4.66e-01 82.3% 95.1%
6u3wB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 45.0 3.48e-01 100.0% 34.4%
2g0dA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.59 52.0 3.70e-01 100.0% 47.0%
5l0wB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 41.0 4.02e-01 89.5% 65.9%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.58 41.0 4.09e-01 72.6% 86.7%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 51.0 4.51e-01 100.0% 71.9%
8hixR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.58 47.0 3.67e-01 88.7% 65.8%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 38.0 4.24e-01 88.7% 92.2%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 41.0 3.43e-01 100.0% 42.1%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 46.0 3.54e-01 87.9% 74.7%
4abnA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 45.0 3.50e-01 100.0% 38.0%
2l7nA00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.56 40.0 3.66e-01 74.2% 66.7%
3fflA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 40.0 4.00e-01 97.6% 73.8%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.55 37.0 3.65e-01 73.4% 63.4%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.55 39.0 3.81e-01 73.4% 76.6%
1xvpB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 42.0 3.41e-01 82.3% 87.0%
3rjvA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 38.0 3.67e-01 100.0% 61.1%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 38.0 3.73e-01 73.4% 80.0%
4iu9B01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.53 39.0 3.31e-01 78.2% 60.3%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 42.0 3.76e-01 87.1% 86.3%
3m1mA03 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.53 35.0 3.68e-01 75.0% 75.5%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 38.0 3.68e-01 100.0% 66.0%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 37.0 3.63e-01 98.4% 66.4%
5dckA00 1.10.1200.30 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain 0.51 29.0 3.56e-01 94.4% 95.8%
7dl9B02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.51 37.0 3.19e-01 75.8% 61.6%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.51 43.0 3.79e-01 94.4% 64.8%
3he0B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 42.0 3.80e-01 91.9% 81.5%
4xt1A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 42.0 3.28e-01 92.7% 69.8%
6wb9201 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 45.0 3.47e-01 100.0% 50.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3379198 109.4.1.299 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ltn1_1st 0.73 66.0 3.94e-01 100.0% 15.4%
4001455 109.4.1.1407 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA 0.68 60.0 3.78e-01 98.4% 31.2%
3883325 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 58.0 4.14e-01 99.2% 32.2%
3639316 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 60.0 5.07e-01 100.0% 82.9%
3497614 109.4.1.570 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps8 0.67 61.0 3.83e-01 100.0% 41.4%
3451824 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.66 47.0 4.91e-01 100.0% 79.1%
3794747 109.4.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 0.66 60.0 4.49e-01 98.4% 48.0%
3461168 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 50.0 3.29e-01 100.0% 19.0%
3818016 109.4.1.1356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, PPR_long 0.66 47.0 4.73e-01 97.6% 72.8%
3824817 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.65 45.0 4.89e-01 97.6% 86.0%
3378289 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.65 53.0 4.95e-01 100.0% 69.7%
3840772 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 54.0 4.46e-01 100.0% 49.8%
3357962 109.4.1.1440 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 0.65 48.0 3.64e-01 100.0% 32.5%
3830930 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.65 46.0 4.90e-01 99.2% 85.7%
3832025 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.64 49.0 4.73e-01 100.0% 69.7%
3441099 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.64 49.0 4.91e-01 96.8% 80.0%
3493878 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.64 58.0 5.34e-01 100.0% 82.5%
3823524 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.64 47.0 4.69e-01 96.8% 76.0%
3318167 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.63 43.0 4.68e-01 98.4% 82.9%
3650958 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 47.0 3.68e-01 99.2% 36.9%
3308044 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.63 43.0 4.24e-01 99.2% 64.4%
3437191 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.63 42.0 4.43e-01 98.4% 74.6%
3468036 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.63 44.0 4.38e-01 97.6% 69.2%
3424707 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 44.0 3.88e-01 100.0% 48.6%
3818260 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.63 45.0 4.34e-01 98.4% 65.7%
3968213 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 47.0 3.57e-01 100.0% 32.3%
3426412 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 50.0 4.85e-01 99.2% 76.4%
3405561 603.1.1.90 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Trehalose_recp 0.62 56.0 3.92e-01 98.4% 91.1%
3320131 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.61 45.0 4.26e-01 100.0% 64.0%
3326711 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 49.0 4.75e-01 96.8% 77.0%
3430171 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 54.0 3.75e-01 100.0% 38.9%
3453923 109.4.1.1365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, TPR_24 0.61 43.0 4.59e-01 100.0% 86.7%
3320289 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.60 43.0 4.44e-01 96.0% 77.5%
3814937 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.60 51.0 5.03e-01 100.0% 86.2%
3413712 603.1.1.101 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_6 0.60 54.0 3.95e-01 99.2% 90.9%
3420666 109.4.1.1296 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long, TPR_24 0.60 45.0 3.33e-01 96.0% 28.8%
3334415 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.60 43.0 4.19e-01 99.2% 66.4%
3645841 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.60 44.0 4.76e-01 100.0% 96.0%
3448938 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.60 43.0 3.93e-01 100.0% 55.3%
3810047 109.4.1.775 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 43.0 4.52e-01 91.9% 83.6%
3680466 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 43.0 4.26e-01 100.0% 69.6%
3463299 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 50.0 4.94e-01 100.0% 85.4%
3829314 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.59 47.0 4.41e-01 100.0% 69.3%
3462156 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 50.0 3.44e-01 100.0% 26.1%
3822409 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.59 42.0 4.03e-01 100.0% 62.0%
3669084 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.59 44.0 4.36e-01 100.0% 72.6%
3321592 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.58 45.0 4.42e-01 100.0% 75.0%
3563946 109.4.1.1524 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ZFYVE26 0.58 52.0 3.53e-01 99.2% 31.3%
3380704 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.57 43.0 4.38e-01 100.0% 81.7%
3394353 603.1.1.90 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Trehalose_recp 0.56 48.0 3.54e-01 95.2% 66.4%
5047141 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 40.0 3.43e-01 81.5% 44.3%
3647423 109.4.1.1365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, TPR_24 0.56 47.0 4.65e-01 100.0% 84.4%
3330210 109.4.1.1282 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 0.56 42.0 3.89e-01 96.8% 60.6%
3965561 109.4.1.940 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Slam 0.55 38.0 3.59e-01 97.6% 56.8%
3373037 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.55 42.0 4.31e-01 100.0% 87.0%
3352830 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 45.0 4.45e-01 100.0% 82.2%
4032059 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 39.0 3.95e-01 99.2% 73.6%
3425615 109.4.1.1356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, PPR_long 0.54 42.0 4.19e-01 99.2% 79.3%
3342481 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.54 46.0 3.81e-01 98.4% 51.3%
3428170 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.53 44.0 3.60e-01 91.1% 51.1%
3323757 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.52 46.0 4.53e-01 100.0% 90.4%
3320780 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.50 45.0 3.56e-01 100.0% 62.3%
D4 medium residues 312-382
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rg8A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 56.0 4.53e-01 100.0% 66.7%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 53.0 4.20e-01 100.0% 78.8%
1ywfA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 49.0 3.44e-01 90.1% 80.5%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.61 42.0 4.03e-01 73.2% 80.0%
4eahA00 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.59 44.0 2.89e-01 83.1% 56.6%
1xd4A04 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.59 46.0 3.42e-01 91.5% 52.8%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.59 44.0 4.16e-01 83.1% 93.3%
4rv1F00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 49.0 3.15e-01 100.0% 30.4%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 51.0 3.67e-01 100.0% 57.4%
1nlxA00 1.20.120.320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Group V grass pollen allergen 0.56 38.0 3.40e-01 70.4% 87.5%
3l0mA02 1.20.1280.280 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 38.0 3.72e-01 70.4% 91.0%
2eyqA07 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.55 41.0 3.22e-01 78.9% 79.6%
4dlqA02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 45.0 4.13e-01 95.8% 100.0%
3p5pA03 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 43.0 2.94e-01 100.0% 51.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3625019 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 3.99e-01 98.6% 60.0%
3620092 3860.1.1.0 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.63 32.0 2.59e-01 81.7% 24.4%
3737457 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.63 54.0 4.33e-01 100.0% 50.7%
3608296 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 4.55e-01 97.2% 87.6%
3597591 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.60 30.0 3.07e-01 81.7% 45.7%
3705231 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.59 42.0 4.36e-01 73.2% 92.3%
3707196 102.1.1.95 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF7578 0.58 41.0 3.29e-01 73.2% 91.9%
3711184 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.58 41.0 4.43e-01 95.8% 86.7%
5058842 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.54 38.0 3.55e-01 73.2% 91.1%
4947640 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 46.0 3.26e-01 100.0% 89.8%
5011995 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.51 37.0 3.33e-01 77.5% 58.0%
3594615 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.50 36.0 3.50e-01 76.1% 83.7%