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hypothetical_protein_MIMI_gp0279

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0279__YP_003986753__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986753 ↗
Protein ID:
hypothetical_protein_MIMI_gp0279
Kingdom:
euk

Quality

61.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 138-267_280-308
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 36.0 4.76e-01 71.1% 86.4%
3n2oA03 1.20.58.930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 37.0 4.61e-01 82.4% 85.4%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.65 40.0 4.72e-01 70.4% 89.1%
4ikhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 42.0 4.68e-01 86.2% 85.0%
3m0fB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 42.0 4.64e-01 89.3% 87.0%
3m3mA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 40.0 4.60e-01 87.4% 89.7%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.61 37.0 4.56e-01 97.5% 99.0%
7fhyB01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.61 47.0 3.86e-01 100.0% 44.7%
7miqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 39.0 4.50e-01 87.4% 93.6%
3dbyL00 1.20.1260.120 Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 0.59 46.0 3.85e-01 79.9% 91.9%
4ivfA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 40.0 4.57e-01 86.8% 94.8%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 37.0 4.45e-01 98.1% 97.1%
2v7kA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 53.0 4.83e-01 100.0% 97.7%
3lxzB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 39.0 4.12e-01 85.5% 76.8%
3chxC00 1.20.1050.50 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Particulate methane monooxygenase subunit c2. Chain: C 0.58 45.0 4.51e-01 80.5% 95.6%
5mdtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 43.0 4.46e-01 91.8% 83.6%
3c8eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 42.0 4.24e-01 89.9% 78.3%
1yz5B00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.56 48.0 4.25e-01 95.0% 64.2%
3nyjA00 1.20.120.770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain 0.56 37.0 3.60e-01 100.0% 59.1%
7qx4A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.55 43.0 3.82e-01 99.4% 56.4%
1yw0A00 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 49.0 4.28e-01 98.7% 88.5%
1z23A00 1.20.120.830 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain 0.54 39.0 3.86e-01 96.9% 70.6%
8etcb01 1.20.120.1190 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 33.0 3.42e-01 77.4% 65.1%
2pfdA03 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.53 45.0 4.19e-01 89.9% 86.7%
4qhpA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.53 46.0 3.64e-01 93.1% 63.9%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.53 42.0 4.09e-01 89.3% 75.6%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.52 35.0 3.96e-01 83.6% 87.2%
3qbmB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 44.0 4.08e-01 98.1% 71.6%
3ajmB02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.50 35.0 3.79e-01 83.0% 84.2%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3196706 603.1.1.97 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.68 53.0 4.56e-01 81.8% 71.8%
3932885 109.4.1.759 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin 0.67 58.0 4.43e-01 91.8% 45.4%
3498465 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.64 47.0 5.21e-01 84.3% 95.2%
3797233 603.5.1.0 ↗ alpha bundles › STAT-like › FlgN-like › FlgN-like 0.64 57.0 5.46e-01 95.6% 94.4%
3466962 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 56.0 5.06e-01 96.2% 78.2%
3735296 603.5.1.0 ↗ alpha bundles › STAT-like › FlgN-like › FlgN-like 0.63 57.0 5.33e-01 96.9% 82.1%
3623993 603.1.1.17 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.63 50.0 4.46e-01 84.3% 75.2%
3414266 109.4.1.880 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_6th 0.63 58.0 5.02e-01 99.4% 80.8%
3227820 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.63 48.0 5.09e-01 88.1% 89.9%
3591157 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.63 53.0 5.35e-01 100.0% 89.4%
3264821 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 49.0 4.66e-01 94.3% 68.9%
3544424 109.4.1.513 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CCDC142 0.62 57.0 4.50e-01 100.0% 68.1%
4029016 109.4.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 0.62 50.0 4.23e-01 95.6% 52.3%
3593619 603.1.1.17 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.61 49.0 4.28e-01 83.6% 79.1%
3612777 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 54.0 4.97e-01 96.2% 75.6%
3748995 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 55.0 5.02e-01 100.0% 84.7%
3639947 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.60 48.0 4.57e-01 84.3% 95.7%
4027056 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 45.0 4.82e-01 88.7% 91.4%
3593724 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 37.0 4.14e-01 73.6% 80.0%
3595526 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.58 39.0 4.11e-01 85.5% 75.0%
1157010 604.5.1.2 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.58 35.0 4.31e-01 96.9% 95.9%
3425147 109.4.1.1557 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_RNF123 0.57 52.0 4.86e-01 100.0% 82.6%
4942097 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 42.0 3.78e-01 76.1% 70.9%
3262164 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 52.0 4.35e-01 97.5% 96.9%
3375240 3755.3.1.575 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BPS1 0.57 43.0 4.15e-01 79.2% 94.6%
3672885 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.56 45.0 3.43e-01 84.9% 72.1%
4495127 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 51.0 4.71e-01 98.7% 78.5%
3736832 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 4.07e-01 100.0% 59.6%
3633501 5069.1.1.4 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct 0.56 49.0 4.06e-01 96.9% 71.9%
3249531 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.55 39.0 4.27e-01 76.1% 87.7%
3628150 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.55 43.0 2.84e-01 81.8% 29.5%
4030233 603.1.1.6 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.55 46.0 4.29e-01 88.7% 90.8%
3519678 109.4.1.152 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN7 0.54 41.0 3.66e-01 78.6% 58.2%
3238154 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.54 39.0 3.78e-01 74.2% 78.3%
3722068 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.54 50.0 3.49e-01 99.4% 38.2%
3616821 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.53 37.0 4.04e-01 74.2% 86.9%
4297406 601.1.2.81 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Serinc 0.53 41.0 4.12e-01 80.5% 91.9%
3486164 109.4.1.200 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 0.52 39.0 4.35e-01 96.2% 100.0%
3272925 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.52 37.0 4.07e-01 78.6% 92.0%
3899472 5050.1.1.6 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP 0.51 38.0 3.23e-01 76.1% 47.8%
3203940 5073.1.2.0 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain 0.51 40.0 3.28e-01 82.4% 72.3%
3221645 5001.1.1.27 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre 0.51 42.0 3.49e-01 89.3% 58.0%
3729299 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.51 38.0 3.85e-01 76.1% 81.3%
3220984 5001.1.1.60 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx 0.51 43.0 3.56e-01 94.3% 65.9%
5060951 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.51 44.0 3.27e-01 94.3% 49.2%
3893417 601.1.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CAS_C 0.50 35.0 3.78e-01 76.7% 85.2%
D2 medium residues 1-64
PDB
D3 medium residues 65-137
PDB