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hypothetical_protein_MIMI_gp0293

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0293__YP_003986767__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986767 ↗
Protein ID:
hypothetical_protein_MIMI_gp0293
Kingdom:
euk

Quality

74.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-149
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.67 59.0 5.67e-01 100.0% 83.9%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.64 54.0 5.57e-01 100.0% 96.6%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 31.0 3.38e-01 100.0% 55.8%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.57 40.0 3.79e-01 100.0% 62.1%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.85e-01 96.8% 68.6%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 29.0 3.54e-01 96.0% 87.8%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 3.47e-01 71.8% 97.1%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248970 101.1.12.0 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.77 65.0 6.84e-01 100.0% 100.0%
3489068 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.71 67.0 6.42e-01 100.0% 97.9%
4539150 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.71 66.0 6.44e-01 98.4% 98.5%
3721174 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.67 62.0 5.94e-01 100.0% 92.1%
3396245 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.66 32.0 2.78e-01 100.0% 30.5%
3507165 719.1.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.64 57.0 5.69e-01 100.0% 96.0%
3849839 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.64 34.0 3.83e-01 93.5% 65.0%
3805804 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.63 36.0 4.31e-01 84.7% 82.4%
3640668 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.62 56.0 5.66e-01 100.0% 98.4%
3735138 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.61 55.0 5.52e-01 100.0% 97.6%
3403847 9.1.1.47 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Chitin_bind_4 0.59 33.0 3.77e-01 83.9% 74.4%
4265077 5084.1.1.34 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.51 37.0 3.42e-01 75.8% 98.1%
4116159 330.1.1.5 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.50 30.0 3.46e-01 94.4% 81.1%
D2 medium residues 213-264
PDB