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hypothetical_protein_MIMI_gp0337
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0337__YP_003986811__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986811 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0337
- Kingdom:
- euk
Quality
70.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-64
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r01A02 | 2.20.180.10 | Mainly Beta › Single Sheet › putative fmn-dependent nitroreductase like fold › putative fmn-dependent nitroreductase like domains | 0.74 | 53.0 | 5.07e-01 | 100.0% | 64.3% |
| 3rh7A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 51.0 | 3.44e-01 | 100.0% | 55.0% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.61 | 43.0 | 2.63e-01 | 83.3% | 35.5% |
| 2jrrA01 | 2.60.260.40 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › q5lls5 like domains | 0.60 | 45.0 | 4.02e-01 | 96.7% | 86.8% |
| 3m1gA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 42.0 | 3.00e-01 | 100.0% | 22.0% |
| 3hftA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.59 | 43.0 | 2.66e-01 | 100.0% | 12.8% |
| 3cskA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.60e-01 | 100.0% | 48.7% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 40.0 | 2.41e-01 | 86.7% | 89.1% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 41.0 | 2.56e-01 | 100.0% | 46.1% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 2.48e-01 | 90.0% | 27.0% |
| 3u2sC00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 39.0 | 3.02e-01 | 96.7% | 95.6% |
| 1zxhA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 38.0 | 3.36e-01 | 96.7% | 92.9% |
| 2ab0A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 37.0 | 2.41e-01 | 96.7% | 28.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4537352 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.74 | 57.0 | 3.70e-01 | 100.0% | 18.1% |
| 3586986 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.69 | 52.0 | 3.53e-01 | 100.0% | 20.7% |
| 4960523 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.67 | 49.0 | 3.41e-01 | 100.0% | 22.6% |
| 5055672 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.66 | 47.0 | 3.43e-01 | 100.0% | 24.8% |
| 3286933 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 48.0 | 3.32e-01 | 100.0% | 22.4% |
| 3614964 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.62 | 53.0 | 3.30e-01 | 100.0% | 56.6% |
| 4983979 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 48.0 | 3.29e-01 | 96.7% | 23.5% |
| 3954373 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 44.0 | 2.62e-01 | 100.0% | 9.2% |
| 4276336 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.59 | 45.0 | 3.01e-01 | 100.0% | 19.3% |
| 2666456 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.59 | 43.0 | 4.20e-01 | 96.7% | 85.0% |
| 2448213 | 10.32.1.37 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin | 0.59 | 43.0 | 2.78e-01 | 96.7% | 18.2% |
| 4942840 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 44.0 | 3.17e-01 | 100.0% | 26.7% |
| 3574082 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.58 | 42.0 | 3.37e-01 | 100.0% | 34.4% |
| 5062589 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 46.0 | 3.16e-01 | 100.0% | 69.2% |
| 3978800 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.58 | 45.0 | 3.09e-01 | 100.0% | 64.8% |
| 4028468 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.58 | 40.0 | 2.77e-01 | 90.0% | 21.0% |
| 4232269 | 2498.1.1.75 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MPTase-PolyVal | 0.57 | 45.0 | 2.97e-01 | 100.0% | 17.9% |
| 4296702 | 706.2.1.3 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › SasG_E | 0.56 | 41.0 | 4.17e-01 | 100.0% | 93.3% |
| 3944419 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.56 | 43.0 | 3.23e-01 | 96.7% | 92.2% |
| 4408820 | 148.1.3.48 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Lon_lid | 0.55 | 40.0 | 2.93e-01 | 100.0% | 72.2% |
| 3500146 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 41.0 | 3.31e-01 | 100.0% | 57.5% |
| 4024757 | 3609.1.1.0 ↗ | alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain | 0.55 | 42.0 | 3.95e-01 | 90.0% | 87.5% |
| 3631007 | 2.1.1.72 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1PC | 0.54 | 38.0 | 3.07e-01 | 100.0% | 48.9% |
| 3716983 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 38.0 | 3.14e-01 | 100.0% | 40.0% |
| 3928687 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 42.0 | 2.48e-01 | 100.0% | 9.3% |
| 3309226 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.50 | 35.0 | 2.64e-01 | 96.7% | 49.6% |