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hypothetical_protein_MIMI_gp0346
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0346__YP_003986820__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986820 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0346
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 142-225
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b89A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 47.0 | 5.61e-01 | 89.3% | 100.0% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.73 | 64.0 | 6.19e-01 | 97.6% | 86.5% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.72 | 59.0 | 5.84e-01 | 98.8% | 86.4% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.70 | 46.0 | 4.72e-01 | 94.0% | 70.9% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.66 | 56.0 | 3.95e-01 | 91.7% | 37.1% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.64 | 47.0 | 5.12e-01 | 97.6% | 100.0% |
| 2w31A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 45.0 | 3.72e-01 | 76.2% | 73.0% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 3.80e-01 | 96.4% | 40.6% |
| 1jwnA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 40.0 | 3.37e-01 | 72.6% | 76.6% |
| 4nlbA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.57 | 39.0 | 3.84e-01 | 97.6% | 64.9% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 50.0 | 3.80e-01 | 100.0% | 42.0% |
| 6fmhB01 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.57 | 46.0 | 3.70e-01 | 95.2% | 44.2% |
| 1pw4A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 40.0 | 3.09e-01 | 76.2% | 73.6% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 48.0 | 4.48e-01 | 96.4% | 93.5% |
| 2w53B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 47.0 | 3.73e-01 | 96.4% | 45.1% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.56 | 43.0 | 4.31e-01 | 98.8% | 81.6% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 42.0 | 4.00e-01 | 84.5% | 83.5% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 3.90e-01 | 86.9% | 71.3% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.55 | 46.0 | 4.70e-01 | 96.4% | 95.1% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 43.0 | 3.41e-01 | 100.0% | 42.8% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 44.0 | 3.81e-01 | 95.2% | 64.5% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.53 | 43.0 | 3.65e-01 | 98.8% | 53.5% |
| 4c2uA04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.53 | 36.0 | 2.93e-01 | 70.2% | 84.0% |
| 2mgxA00 | 1.20.940.10 | Mainly Alpha › Up-down Bundle › RNA Binding Protein, Prp18; Chain A › Functional domain of the splicing factor Prp18 | 0.52 | 43.0 | 3.79e-01 | 94.0% | 74.0% |
| 6jpaE00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.52 | 43.0 | 3.49e-01 | 92.9% | 60.9% |
| 5grqA00 | 1.10.8.810 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Daxx helical bundle domain | 0.52 | 43.0 | 4.23e-01 | 92.9% | 87.8% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 46.0 | 3.83e-01 | 100.0% | 57.2% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 3.49e-01 | 100.0% | 44.0% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.51 | 41.0 | 3.53e-01 | 86.9% | 61.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4569058 | 105.1.1.8 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Kri1 | 0.78 | 53.0 | 4.65e-01 | 70.2% | 86.7% |
| 3683526 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.69 | 54.0 | 3.98e-01 | 83.3% | 37.2% |
| 3963643 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 53.0 | 5.29e-01 | 91.7% | 100.0% |
| 4942761 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 56.0 | 5.62e-01 | 97.6% | 100.0% |
| 5065029 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.63 | 44.0 | 3.80e-01 | 100.0% | 45.9% |
| 3892427 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.62 | 52.0 | 3.73e-01 | 95.2% | 36.3% |
| 3610579 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.61 | 40.0 | 3.90e-01 | 100.0% | 62.2% |
| 5030379 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.61 | 52.0 | 5.10e-01 | 97.6% | 100.0% |
| 3836710 | 109.4.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C | 0.59 | 42.0 | 2.84e-01 | 75.0% | 74.6% |
| 3285087 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.59 | 40.0 | 3.49e-01 | 70.2% | 76.9% |
| 4673493 | 607.1.1.1 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N | 0.58 | 44.0 | 3.91e-01 | 81.0% | 87.2% |
| 4033272 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.57 | 46.0 | 4.14e-01 | 89.3% | 78.3% |
| 4022116 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.56 | 45.0 | 3.24e-01 | 89.3% | 38.9% |
| 3267356 | 5001.1.1.8 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HlyIII | 0.56 | 47.0 | 3.27e-01 | 91.7% | 27.5% |
| 5063209 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.56 | 44.0 | 3.29e-01 | 85.7% | 61.9% |
| 3226789 | 5001.1.1.62 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › YIF1 | 0.55 | 46.0 | 3.57e-01 | 95.2% | 100.0% |
| 3257705 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.55 | 45.0 | 4.33e-01 | 88.1% | 91.6% |
| 3894393 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.55 | 48.0 | 4.03e-01 | 100.0% | 56.7% |
| 3252296 | 601.55.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 › NCA2 | 0.55 | 42.0 | 4.02e-01 | 81.0% | 83.2% |
| 5038613 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.54 | 47.0 | 4.57e-01 | 100.0% | 94.7% |
| 4591251 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.54 | 40.0 | 4.01e-01 | 91.7% | 78.8% |
| 5070330 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.53 | 47.0 | 3.50e-01 | 100.0% | 80.4% |
| 4944472 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 46.0 | 3.12e-01 | 96.4% | 90.3% |
| 5007277 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.53 | 41.0 | 4.11e-01 | 91.7% | 83.5% |
| 3229885 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.52 | 44.0 | 4.25e-01 | 92.9% | 81.6% |
| 4025973 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.51 | 42.0 | 2.88e-01 | 90.5% | 73.0% |
| 3863017 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 45.0 | 3.28e-01 | 100.0% | 75.8% |
| 3655176 | 5050.1.1.28 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › BT1 | 0.51 | 44.0 | 3.06e-01 | 98.8% | 85.7% |
| 3969010 | 129.1.1.29 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › BTP | 0.51 | 44.0 | 3.75e-01 | 97.6% | 65.7% |
| 3339004 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.51 | 45.0 | 3.84e-01 | 97.6% | 80.0% |
D2
medium
residues 21-138