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hypothetical_protein_MIMI_gp0465

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0465__YP_003986939__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986939 ↗
Protein ID:
hypothetical_protein_MIMI_gp0465
Kingdom:
euk

Quality

70.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-99_197-286
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF19150.6 best DUF5832 55.8 6.50e-15 35.4% 66.7%
PF19150.6 DUF5832 57.0 2.80e-15 35.4% 70.4%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 27.0 3.58e-01 90.7% 65.1%
1nxiA00 3.30.70.970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like 0.51 28.0 3.14e-01 82.6% 66.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3718180 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.67 26.0 3.40e-01 70.2% 61.1%
5028999 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 29.0 3.60e-01 85.1% 87.0%
4216562 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.52 28.0 3.74e-01 84.5% 95.6%
3907467 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.50 28.0 3.54e-01 77.0% 97.6%
D2 medium residues 103-193
PDB
D3 medium residues 287-338
PDB
Domain cluster: representative