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hypothetical_protein_MIMI_gp0496

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0496__YP_003986969__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:: YP_003986969 ↗
Protein ID:: hypothetical_protein_MIMI_gp0496
Kingdom:: euk

Quality

61.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-120

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nrkA00	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.55	37.0	2.93e-01	71.8%	55.2%
2r40D00	1.10.565.10	Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor	0.54	44.0	3.16e-01	93.0%	81.5%
2qsaA00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.54	43.0	3.89e-01	93.0%	62.4%
3m1tA00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.53	43.0	3.06e-01	97.2%	69.9%
2e5zA01	1.10.10.790	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module	0.53	34.0	3.71e-01	80.3%	79.7%
1wxpA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.53	34.0	3.29e-01	77.5%	54.8%
3qvmB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.52	35.0	2.38e-01	70.4%	58.6%
3ph0C00	1.25.40.1040	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	31.0	3.48e-01	100.0%	79.2%
3l1nA02	1.20.1280.140	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.52	45.0	4.27e-01	97.2%	89.7%
3ag7A00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.52	44.0	3.94e-01	97.2%	83.8%
4oydB00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.52	45.0	3.86e-01	100.0%	82.9%
2dwkA00	1.20.58.900	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain	0.51	46.0	3.54e-01	100.0%	87.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028461	633.24.1.2 ↗	alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601	0.58	50.0	4.78e-01	98.6%	81.2%
3227171	207.1.1.104 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_Zer-1	0.58	42.0	2.79e-01	77.5%	23.8%
3784813	621.1.1.7 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › EMC6	0.57	47.0	4.34e-01	95.8%	76.5%
3611526	192.4.1.0 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p)	0.57	49.0	4.59e-01	98.6%	76.7%
3283176	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.56	48.0	3.29e-01	94.4%	55.7%
3606171	109.4.1.414 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N	0.56	48.0	3.34e-01	100.0%	42.7%
3971935	601.7.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain	0.55	48.0	4.19e-01	100.0%	80.9%
4026202	192.15.1.0 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains	0.52	43.0	4.01e-01	90.1%	80.0%

D2 medium residues 121-200

PDB