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hypothetical_protein_MIMI_gp0503

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0503__YP_003986975__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:: YP_003986975 ↗
Protein ID:: hypothetical_protein_MIMI_gp0503
Kingdom:: euk

Quality

57.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-82

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19066.6 best	P9_TM	89.0	1.90e-25	94.4%	98.6%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1sb7A02	3.30.2340.10	Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain	0.71	51.0	4.08e-01	75.0%	83.8%
2eucA00	1.10.8.570	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB	0.68	40.0	3.50e-01	76.4%	38.3%
1f2eA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.68	48.0	4.19e-01	73.6%	79.2%
4udsA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.66	49.0	3.61e-01	79.2%	53.2%
2yksA02	1.20.58.390	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain	0.65	48.0	4.11e-01	79.2%	85.5%
4hteA03	1.10.167.30	Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 ›	0.60	34.0	3.29e-01	87.5%	51.2%
2rkkA01	1.25.40.270	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1	0.54	43.0	3.40e-01	87.5%	84.6%
3hbjA01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.51	40.0	2.81e-01	90.3%	70.5%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3244615	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.72	54.0	3.56e-01	79.2%	51.2%
3399198	5054.1.1.0 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels	0.66	49.0	3.84e-01	79.2%	78.1%
3371967	129.1.1.46 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › TYRAAT1_C	0.66	45.0	3.96e-01	70.8%	83.5%
4605079	109.4.1.451 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39	0.65	54.0	3.08e-01	88.9%	88.0%
3739589	141.1.1.0 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases	0.63	52.0	3.59e-01	93.1%	50.6%
3924410	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.63	52.0	3.49e-01	91.7%	78.6%
3730623	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.62	51.0	3.09e-01	91.7%	40.4%
2966880	149.1.1.0 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450	0.62	46.0	2.90e-01	80.6%	78.9%
4015019	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.61	53.0	3.70e-01	100.0%	72.0%
3372123	7512.1.1.0 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase	0.60	49.0	3.34e-01	93.1%	61.1%
3187164	109.4.1.954 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_N	0.52	44.0	3.10e-01	97.2%	68.6%