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hypothetical_protein_MIMI_gp0581

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0581__YP_003987054__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003987054 ↗
Protein ID:
hypothetical_protein_MIMI_gp0581
Kingdom:
euk

Quality

70.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-72
PDB
D2 high residues 75-150
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 51.0 5.65e-01 73.7% 88.5%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 5.20e-01 73.7% 100.0%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.20e-01 71.1% 72.3%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 48.0 4.46e-01 76.3% 66.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.03e-01 80.3% 93.1%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 41.0 4.92e-01 72.4% 100.0%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 38.0 4.53e-01 73.7% 93.8%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.62 47.0 5.08e-01 88.2% 100.0%
4ch7A01 1.10.10.2890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 44.0 3.91e-01 76.3% 72.4%
3gziA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 45.0 3.32e-01 78.9% 55.2%
2b8iA00 1.20.1280.100 Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain 0.60 41.0 4.17e-01 72.4% 72.7%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 45.0 4.28e-01 81.6% 72.0%
6xy4A01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.59 50.0 4.41e-01 100.0% 68.3%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.07e-01 75.0% 74.4%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.58 40.0 4.49e-01 73.7% 100.0%
2ecbA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 36.0 4.10e-01 71.1% 96.1%
2xl4A00 1.20.120.1420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain 0.57 41.0 3.37e-01 77.6% 62.6%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 36.0 3.81e-01 71.1% 93.9%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.51 37.0 2.87e-01 78.9% 51.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973148 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.75 53.0 5.05e-01 73.7% 64.8%
3868763 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 45.0 5.10e-01 72.4% 90.9%
3878498 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 43.0 4.97e-01 71.1% 89.1%
4345364 3697.1.1.1 ↗ alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.68 44.0 4.84e-01 71.1% 83.3%
4974615 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 54.0 5.62e-01 86.8% 100.0%
3399487 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.67 53.0 4.42e-01 86.8% 80.0%
4201679 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 44.0 4.31e-01 71.1% 65.9%
3243457 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 48.0 3.97e-01 81.6% 67.9%
3246596 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.62 39.0 3.95e-01 71.1% 64.0%
4985440 604.10.1.0 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.61 46.0 4.69e-01 80.3% 100.0%
3531199 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.61 38.0 4.09e-01 71.1% 73.8%
184529 198.3.1.1 ↗ alpha arrays › Saposin-like › PAS factor › PAS factor › Pas_Saposin 0.60 41.0 4.17e-01 72.4% 72.7%
3796365 101.1.1.421 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain, CUT 0.59 38.0 2.84e-01 71.1% 25.1%
5057848 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 43.0 3.88e-01 78.9% 77.3%
3272819 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.59 47.0 4.24e-01 90.8% 99.1%
3767171 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.57 39.0 3.70e-01 72.4% 77.9%
3652032 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 41.0 4.17e-01 76.3% 93.3%
3244509 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 39.0 3.55e-01 72.4% 64.5%
3290723 601.1.1.85 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PaaX_C 0.57 44.0 4.03e-01 86.8% 90.5%
3483583 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 37.0 3.81e-01 71.1% 69.3%
3219862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 38.0 4.01e-01 71.1% 83.1%
3889817 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.55 36.0 3.62e-01 71.1% 65.0%
3219867 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 35.0 3.46e-01 71.1% 78.8%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.52 38.0 2.97e-01 80.3% 100.0%
D3 high residues 153-273
PDB
Domain cluster: rep: hypothetical_protein_H012_gp350__YP_007354541__Acanthamoeba_polyphaga_moumouvirus__1269028__D164-264
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14811.12 best TPD 61.2 1.30e-16 92.6% 72.5%