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hypothetical_protein_MIMI_gp0604
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0604__YP_003987076__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003987076 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0604
- Kingdom:
- euk
Quality
55.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 145-181
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.81 | 56.0 | 4.14e-01 | 73.0% | 31.5% |
| 2xpiD00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 55.0 | 3.03e-01 | 73.0% | 5.6% |
| 3ilxA02 | 1.10.287.2170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 58.0 | 5.48e-01 | 83.8% | 100.0% |
| 3gffA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.74 | 55.0 | 3.19e-01 | 81.1% | 79.4% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 51.0 | 4.27e-01 | 73.0% | 45.3% |
| 3htmA02 | 6.10.250.3030 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.73 | 50.0 | 4.89e-01 | 70.3% | 67.5% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.71 | 58.0 | 3.70e-01 | 91.9% | 18.6% |
| 4tq1A03 | 1.10.246.190 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain | 0.69 | 56.0 | 4.85e-01 | 91.9% | 62.1% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 49.0 | 4.44e-01 | 81.1% | 81.8% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 48.0 | 4.37e-01 | 81.1% | 80.0% |
| 3ktcA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 52.0 | 3.06e-01 | 100.0% | 26.7% |
| 3hj6A03 | 6.10.140.490 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 47.0 | 4.83e-01 | 89.2% | 91.4% |
| 3lcvB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 48.0 | 3.08e-01 | 94.6% | 30.7% |
| 7z0sF01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 46.0 | 3.22e-01 | 100.0% | 71.4% |
| 1v4gA01 | 6.10.140.800 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 48.0 | 4.07e-01 | 97.3% | 97.1% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.60 | 45.0 | 3.08e-01 | 81.1% | 21.8% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 48.0 | 4.00e-01 | 100.0% | 78.9% |
| 1tkeA03 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.55 | 45.0 | 4.02e-01 | 100.0% | 81.0% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 2.89e-01 | 100.0% | 40.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3711291 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.80 | 56.0 | 4.78e-01 | 73.0% | 48.3% |
| 1869443 | 226.1.1.2 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 | 0.72 | 48.0 | 3.98e-01 | 70.3% | 40.0% |
| 4680782 | 1054.1.1.1 ↗ | alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C | 0.65 | 54.0 | 5.34e-01 | 97.3% | 97.5% |
| 4576202 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.59 | 43.0 | 2.93e-01 | 94.6% | 18.4% |
| 3685066 | 7516.1.1.9 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_15 | 0.57 | 43.0 | 2.54e-01 | 91.9% | 42.5% |
| 3175560 | 7516.1.1.9 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_15 | 0.57 | 49.0 | 2.86e-01 | 100.0% | 14.6% |
| 3634655 | 7516.1.1.9 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_15 | 0.56 | 48.0 | 2.81e-01 | 100.0% | 16.2% |