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hypothetical_protein_MIMI_gp0733

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0733__YP_003987204__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:: YP_003987204 ↗
Protein ID:: hypothetical_protein_MIMI_gp0733
Kingdom:: euk

Quality

77.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-108

PDB

Domain cluster: rep: MK448516.1__QBX10840.1__JavanS490_0006__00006__D2-76

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wmvA01	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.59	19.0	2.99e-01	77.8%	95.8%
2ysiA01	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.55	24.0	3.28e-01	92.2%	97.0%
5cq2A02	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.54	25.0	3.34e-01	95.6%	88.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3163642	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.80	65.0	6.00e-01	100.0%	69.1%
3785640	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.68	57.0	5.27e-01	91.1%	87.0%
4954530	101.1.9.143 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM	0.68	59.0	5.54e-01	100.0%	84.3%
3624148	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.66	55.0	5.15e-01	90.0%	76.4%
3731164	101.1.9.37 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › CRC_subunit	0.66	57.0	5.28e-01	100.0%	75.4%
3978692	101.1.9.143 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM	0.65	59.0	4.96e-01	100.0%	61.3%
3918298	108.1.1.27 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6	0.57	40.0	4.27e-01	100.0%	88.0%
3230560	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.55	23.0	3.38e-01	88.9%	97.1%
3547911	108.1.1.29 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7	0.55	39.0	4.06e-01	96.7%	81.2%
3992209	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	26.0	3.34e-01	94.4%	86.7%
3907533	64.1.1.0 ↗	beta meanders › WW domain-like › WW domain › WW domain	0.52	24.0	3.26e-01	91.1%	87.5%
5027800	101.1.2.39 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA	0.51	32.0	3.55e-01	88.9%	80.0%
3278866	221.1.2.17 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062	0.50	31.0	3.71e-01	97.8%	95.0%