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hypothetical_protein_MIMI_gp0746

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0746__YP_003987217__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003987217 ↗
Protein ID:
hypothetical_protein_MIMI_gp0746
Kingdom:
euk

Quality

73.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 43-60_304-374
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.72e-01 93.3% 99.4%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.60 35.0 3.09e-01 96.6% 36.7%
4l3rA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.26e-01 93.3% 95.1%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 49.0 4.15e-01 94.4% 72.3%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 51.0 4.68e-01 96.6% 100.0%
1dzkA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 50.0 4.27e-01 96.6% 73.6%
2essA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 37.0 3.58e-01 94.4% 57.6%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.58 50.0 4.11e-01 96.6% 91.6%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 50.0 4.23e-01 96.6% 73.2%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.58 48.0 4.00e-01 93.3% 100.0%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 42.0 3.72e-01 76.4% 87.3%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.57 50.0 3.99e-01 96.6% 92.1%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 4.13e-01 96.6% 70.6%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 4.11e-01 96.6% 71.5%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.56 48.0 3.88e-01 95.5% 95.5%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.56 48.0 4.07e-01 94.4% 75.5%
3holA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.56 49.0 4.17e-01 97.8% 94.5%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 45.0 3.26e-01 88.8% 82.4%
2ej8B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.08e-01 92.1% 77.9%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.86e-01 97.8% 87.8%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.55 46.0 4.32e-01 93.3% 79.6%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.95e-01 93.3% 63.4%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.68e-01 93.3% 68.6%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 3.98e-01 94.4% 83.7%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.84e-01 93.3% 83.5%
1ntvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.71e-01 93.3% 68.4%
6jx5A01 3.30.2160.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain 0.52 30.0 3.24e-01 73.0% 66.7%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.88e-01 94.4% 81.5%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 3.78e-01 92.1% 78.3%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 42.0 3.22e-01 93.3% 100.0%
3so6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.76e-01 92.1% 75.2%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 43.0 3.85e-01 98.9% 95.7%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.54e-01 91.0% 73.4%
2o3bB00 3.40.1460.10 Alpha Beta › 3-Layer(aba) Sandwich › Nuia › Nuclease A inhibitor-like 0.51 42.0 3.68e-01 91.0% 83.0%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.51 44.0 3.85e-01 98.9% 69.5%
1wvhA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 43.0 3.83e-01 96.6% 87.1%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3713628 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 68.0 4.43e-01 97.8% 91.3%
3717200 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.74 66.0 4.32e-01 96.6% 89.7%
3470543 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.71 45.0 3.02e-01 77.5% 16.9%
166755 5.1.3.143 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_3 0.64 55.0 3.48e-01 93.3% 99.3%
4647210 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.64 55.0 3.45e-01 94.4% 98.7%
3360880 5.1.3.57 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 0.61 44.0 3.37e-01 75.3% 34.5%
3991137 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.61 53.0 3.55e-01 95.5% 89.7%
3799340 5.1.3.114 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MIOS_WD40 0.60 50.0 3.37e-01 92.1% 85.4%
2796077 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.58 50.0 3.93e-01 94.4% 91.3%
185577 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.58 48.0 3.98e-01 93.3% 100.0%
3965335 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.57 50.0 3.76e-01 98.9% 85.3%
1309122 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.56 48.0 3.89e-01 95.5% 96.6%
1108151 9.20.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein Tcur_1030 › Uncharacterized protein Tcur_1030 › GXWXG,DUF4334 0.56 48.0 4.06e-01 94.4% 75.0%
3225056 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 4.20e-01 94.4% 70.9%
3407011 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 48.0 3.92e-01 96.6% 68.2%
3482252 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.55 48.0 4.15e-01 96.6% 82.9%
3493894 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.55 47.0 4.15e-01 93.3% 79.2%
3551908 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.55 46.0 3.83e-01 92.1% 81.9%
3536545 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 45.0 3.86e-01 94.4% 69.7%
3625914 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.55 46.0 3.54e-01 92.1% 55.0%
3883155 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.54 46.0 3.87e-01 93.3% 70.7%
3488373 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.54 47.0 4.03e-01 94.4% 75.7%
3476676 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.54 46.0 4.02e-01 93.3% 76.3%
3483594 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.54 46.0 4.11e-01 92.1% 82.4%
3214387 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 4.25e-01 93.3% 83.3%
3478480 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.54 46.0 4.02e-01 93.3% 77.8%
3904091 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.54 45.0 3.88e-01 93.3% 72.4%
3756224 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.54 45.0 3.76e-01 93.3% 73.8%
3472459 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.54 45.0 4.13e-01 93.3% 86.7%
3486620 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.53 46.0 4.13e-01 94.4% 84.0%
3482039 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.93e-01 93.3% 77.8%
3228843 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.80e-01 94.4% 67.7%
3485880 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.53 45.0 4.00e-01 93.3% 79.2%
3559597 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.53 44.0 3.83e-01 93.3% 80.7%
3992152 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.53 46.0 3.89e-01 96.6% 78.0%
3216165 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 4.30e-01 93.3% 81.9%
4003674 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.83e-01 98.9% 74.4%
3494542 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 4.03e-01 93.3% 84.8%
3898261 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.53 44.0 3.73e-01 92.1% 76.0%
3484017 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 4.01e-01 93.3% 80.0%
3597563 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.91e-01 94.4% 64.8%
3548416 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.53 44.0 4.09e-01 95.5% 82.5%
3527300 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.53 45.0 3.65e-01 94.4% 72.4%
3772274 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.53 45.0 3.72e-01 94.4% 68.8%
4535557 220.1.1.192 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C 0.53 44.0 3.55e-01 94.4% 83.2%
5081087 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 45.0 4.26e-01 96.6% 80.9%
3939879 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 45.0 3.79e-01 97.8% 66.9%
3884809 220.1.1.18 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB 0.52 45.0 3.81e-01 96.6% 73.5%
3507655 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 44.0 3.50e-01 93.3% 60.5%
3493625 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.85e-01 94.4% 79.3%
967 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 45.0 3.77e-01 96.6% 76.3%
3479598 220.1.1.165 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem 0.52 44.0 3.81e-01 93.3% 74.3%
3401815 220.1.1.18 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB 0.52 44.0 3.87e-01 94.4% 81.5%
4656099 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 43.0 3.54e-01 92.1% 60.6%
4028425 220.1.1.286 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERLI1 0.52 44.0 3.92e-01 94.4% 68.5%
3850458 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 44.0 3.68e-01 95.5% 70.0%
3586554 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 4.12e-01 96.6% 81.8%
3903560 220.1.1.85 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID_2 0.51 44.0 3.84e-01 96.6% 81.4%
3493167 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.67e-01 94.4% 73.3%
3904601 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.51 42.0 3.59e-01 94.4% 74.8%
5055694 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.91e-01 93.3% 71.3%
3880957 220.1.1.18 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB 0.51 43.0 3.65e-01 94.4% 69.3%
3740616 11.1.3.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like 0.50 43.0 3.83e-01 98.9% 94.1%
D2 medium residues 61-303
PDB
Domain cluster: rep: MW879340.1__QXO10647.1__pEaSNUABM48_00177__00177__D32-310