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hypothetical_protein_MIMI_gp0884

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

hypothetical_protein_MIMI_gp0884__YP_003987353__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003987353 ↗
Protein ID:
hypothetical_protein_MIMI_gp0884
Kingdom:
euk

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D2 high residues 150-218_231-277
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5x8tT00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.57 31.0 2.95e-01 100.0% 42.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968916 101.1.9.63 alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.78 62.0 6.56e-01 98.3% 93.3%
4032453 101.1.9.78 alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA 0.67 52.0 5.59e-01 83.6% 100.0%
3947416 101.1.9.88 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.66 56.0 5.77e-01 97.4% 98.2%
3414363 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.59 43.0 3.02e-01 75.9% 88.1%
5029542 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 38.0 4.02e-01 83.6% 75.2%
5012702 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 43.0 4.35e-01 88.8% 80.9%
3389084 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.53 38.0 2.82e-01 76.7% 77.9%
5041736 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 31.0 3.60e-01 87.1% 86.7%
3211111 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.52 38.0 2.67e-01 75.9% 82.7%
3284008 304.4.1.57 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 0.51 31.0 3.26e-01 100.0% 64.8%
4997598 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.51 36.0 3.71e-01 94.8% 74.8%
D3 medium residues 327-497
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.57 33.0 3.14e-01 72.5% 47.0%