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hypothetical_protein_MIMI_gp0893
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0893__YP_003987362__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003987362 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0893
- Kingdom:
- euk
Quality
61.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 70-93_122-146_165-184_228-262_328-338
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19559.7 best | DUF6081 | 32.8 | 6.20e-08 | 57.4% | 15.1% |
D2
medium
residues 94-121_147-164_263-327_404-433
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19559.7 best | DUF6081 | 49.4 | 5.40e-13 | 59.6% | 33.1% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vy0B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 64.0 | 5.09e-01 | 92.9% | 82.5% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 40.0 | 4.54e-01 | 87.9% | 79.8% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 40.0 | 4.29e-01 | 90.1% | 69.4% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 43.0 | 4.60e-01 | 90.1% | 77.0% |
| 1gbgA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 55.0 | 4.79e-01 | 92.2% | 86.9% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 55.0 | 4.96e-01 | 90.8% | 73.3% |
| 5vxzA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 4.67e-01 | 89.4% | 78.2% |
| 5gm0A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 5.07e-01 | 86.5% | 100.0% |
| 4fffA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.59 | 51.0 | 4.99e-01 | 91.5% | 90.2% |
| 1y4wA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.59 | 51.0 | 4.88e-01 | 91.5% | 88.3% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.58 | 41.0 | 4.43e-01 | 90.1% | 86.3% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 5.07e-01 | 91.5% | 100.0% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 40.0 | 3.97e-01 | 90.1% | 68.8% |
| 3asiA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 4.41e-01 | 88.7% | 83.7% |
| 2ii7H00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.57 | 37.0 | 4.18e-01 | 89.4% | 86.8% |
| 6r3mA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 46.0 | 4.31e-01 | 93.6% | 71.4% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 46.0 | 3.92e-01 | 90.1% | 75.9% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.55 | 29.0 | 3.44e-01 | 80.9% | 75.6% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 25.0 | 3.16e-01 | 70.9% | 74.4% |
| 3isrA02 | 2.60.40.2250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 32.0 | 3.73e-01 | 90.8% | 84.0% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.89e-01 | 97.2% | 66.0% |
| 2vncA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 26.0 | 2.86e-01 | 82.3% | 57.8% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.51 | 37.0 | 3.37e-01 | 91.5% | 56.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3482454 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.68 | 57.0 | 4.94e-01 | 90.1% | 81.4% |
| 5048013 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 41.0 | 4.84e-01 | 90.1% | 89.5% |
| 3230708 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.66 | 42.0 | 3.83e-01 | 90.1% | 48.6% |
| 5014449 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 38.0 | 4.67e-01 | 89.4% | 92.9% |
| 5013355 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 37.0 | 4.69e-01 | 88.7% | 92.9% |
| 3799293 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 42.0 | 4.11e-01 | 92.9% | 60.0% |
| 3178372 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.65 | 55.0 | 4.36e-01 | 90.8% | 77.3% |
| 5025753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 39.0 | 4.64e-01 | 90.8% | 87.8% |
| 3879286 | 3156.1.1.25 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › CUB_CDCP1_1 | 0.64 | 35.0 | 4.52e-01 | 91.5% | 98.7% |
| 3243463 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 40.0 | 3.81e-01 | 90.1% | 54.5% |
| 3933402 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.63 | 40.0 | 4.41e-01 | 92.9% | 79.1% |
| 3243464 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 40.0 | 4.08e-01 | 92.2% | 65.7% |
| 3507127 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.61 | 52.0 | 4.62e-01 | 89.4% | 84.1% |
| 3486965 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 41.0 | 4.10e-01 | 93.6% | 64.7% |
| 4937628 | 11.1.1.1414 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4625 | 0.61 | 35.0 | 3.94e-01 | 91.5% | 72.7% |
| 3236043 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.60 | 35.0 | 3.87e-01 | 91.5% | 69.6% |
| 4984486 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.60 | 36.0 | 4.08e-01 | 91.5% | 78.1% |
| 3234136 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.60 | 51.0 | 5.13e-01 | 87.9% | 95.0% |
| 5040182 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 39.0 | 4.29e-01 | 92.2% | 83.6% |
| 4260622 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.59 | 46.0 | 4.79e-01 | 90.8% | 88.3% |
| 5080778 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.59 | 36.0 | 3.98e-01 | 92.9% | 76.4% |
| 5033248 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 37.0 | 3.97e-01 | 91.5% | 71.2% |
| 3618645 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 49.0 | 4.82e-01 | 88.7% | 100.0% |
| 3987367 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 40.0 | 4.42e-01 | 90.8% | 89.0% |
| 4000176 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.58 | 37.0 | 4.21e-01 | 89.4% | 84.8% |
| 3508967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 41.0 | 4.52e-01 | 93.6% | 90.9% |
| 3999276 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 42.0 | 3.83e-01 | 91.5% | 56.8% |
| 5014780 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 35.0 | 3.89e-01 | 92.2% | 76.4% |
| 4615735 | 10.32.1.274 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27453 | 0.57 | 37.0 | 4.24e-01 | 87.9% | 87.6% |
| 3225139 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.57 | 34.0 | 3.78e-01 | 90.8% | 72.2% |
| 3931398 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 35.0 | 3.92e-01 | 90.8% | 81.0% |
| 4989053 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 36.0 | 3.95e-01 | 92.9% | 78.3% |
| 3469207 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 34.0 | 4.23e-01 | 78.7% | 100.0% |
| 5039248 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 44.0 | 4.35e-01 | 92.9% | 79.3% |
| 4412634 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 35.0 | 3.65e-01 | 92.9% | 70.0% |
| 4362184 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.54 | 39.0 | 4.02e-01 | 92.2% | 80.8% |
| 3231885 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 36.0 | 3.85e-01 | 91.5% | 83.2% |
| 5005245 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 43.0 | 3.61e-01 | 88.7% | 93.9% |
| 5046630 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 36.0 | 3.93e-01 | 83.7% | 89.6% |
D3
medium
residues 339-403