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hypothetical_protein_MIMI_gp0933
Euk-VirAcanthamoeba_polyphaga_mimivirus
hypothetical_protein_MIMI_gp0933__YP_003987403__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003987403 ↗
- Protein ID:
- hypothetical_protein_MIMI_gp0933
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-79
Domain cluster:
rep: hypothetical_protein_MIMI_gp0755__YP_003987225__Acanthamoeba_polyphaga_mimivirus__212035__D10-72
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 51.0 | 4.76e-01 | 97.3% | 64.1% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.67 | 55.0 | 4.44e-01 | 100.0% | 47.2% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 51.0 | 4.87e-01 | 100.0% | 71.9% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 51.0 | 4.68e-01 | 85.3% | 96.0% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.65 | 54.0 | 4.45e-01 | 100.0% | 50.4% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 49.0 | 4.32e-01 | 82.7% | 89.3% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.64 | 46.0 | 4.18e-01 | 85.3% | 54.8% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 5.09e-01 | 100.0% | 78.7% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 50.0 | 5.12e-01 | 97.3% | 87.8% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 51.0 | 5.11e-01 | 100.0% | 84.8% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.63 | 55.0 | 4.66e-01 | 100.0% | 63.4% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 50.0 | 4.78e-01 | 100.0% | 74.2% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.63 | 51.0 | 5.07e-01 | 96.0% | 87.5% |
| 1ll8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 48.0 | 4.23e-01 | 84.0% | 97.4% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 48.0 | 4.32e-01 | 85.3% | 89.9% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 48.0 | 4.12e-01 | 85.3% | 85.7% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 47.0 | 4.80e-01 | 100.0% | 85.3% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.44e-01 | 100.0% | 66.7% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.60 | 44.0 | 4.30e-01 | 100.0% | 69.8% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 51.0 | 3.86e-01 | 98.7% | 84.9% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 47.0 | 3.88e-01 | 85.3% | 73.9% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.60 | 32.0 | 3.17e-01 | 100.0% | 47.5% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 45.0 | 4.13e-01 | 84.0% | 99.0% |
| 4mn5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 46.0 | 4.20e-01 | 85.3% | 88.3% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 45.0 | 3.99e-01 | 85.3% | 87.3% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 45.0 | 4.53e-01 | 100.0% | 82.3% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.59 | 50.0 | 4.56e-01 | 97.3% | 84.3% |
| 3gdiA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 45.0 | 4.04e-01 | 85.3% | 86.5% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 44.0 | 4.16e-01 | 84.0% | 98.9% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 45.0 | 4.06e-01 | 85.3% | 93.5% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 50.0 | 4.41e-01 | 100.0% | 73.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 42.0 | 4.05e-01 | 98.7% | 66.7% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 44.0 | 4.35e-01 | 98.7% | 80.0% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 49.0 | 3.95e-01 | 97.3% | 86.3% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.31e-01 | 100.0% | 77.4% |
| 4kc7A02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 43.0 | 3.95e-01 | 81.3% | 90.9% |
| 1zhhB01 | 3.30.450.220 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain | 0.56 | 43.0 | 3.52e-01 | 86.7% | 53.5% |
| 4hh2C04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 45.0 | 3.93e-01 | 89.3% | 85.5% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 41.0 | 3.51e-01 | 80.0% | 74.4% |
| 2fh5A01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 42.0 | 3.62e-01 | 82.7% | 55.7% |
| 6zj8D01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.73e-01 | 84.0% | 76.3% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 43.0 | 4.13e-01 | 98.7% | 74.2% |
| 3lidA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.59e-01 | 85.3% | 73.9% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.55 | 47.0 | 4.16e-01 | 100.0% | 68.1% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 43.0 | 3.49e-01 | 85.3% | 56.2% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.55 | 45.0 | 3.59e-01 | 96.0% | 44.2% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 3.78e-01 | 96.0% | 88.2% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 4.14e-01 | 98.7% | 68.7% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 3.68e-01 | 92.0% | 86.0% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 40.0 | 3.27e-01 | 80.0% | 61.7% |
| 3vg8A00 | 3.30.200.270 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.54 | 40.0 | 3.62e-01 | 80.0% | 94.3% |
| 2ctkA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 42.0 | 3.90e-01 | 100.0% | 64.4% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 42.0 | 3.26e-01 | 85.3% | 98.8% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 41.0 | 2.79e-01 | 86.7% | 91.6% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 45.0 | 4.33e-01 | 100.0% | 83.0% |
| 1p0zA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 43.0 | 3.59e-01 | 89.3% | 59.5% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.71e-01 | 97.3% | 83.9% |
| 2bg9C01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.52 | 41.0 | 2.99e-01 | 85.3% | 31.6% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 42.0 | 3.53e-01 | 96.0% | 86.2% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.28e-01 | 85.3% | 99.3% |
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.45e-01 | 85.3% | 84.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 44.0 | 3.98e-01 | 100.0% | 67.9% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.52 | 45.0 | 4.00e-01 | 100.0% | 70.3% |
| 3kioC01 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.71e-01 | 84.0% | 81.7% |
| 1kyfA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 42.0 | 3.76e-01 | 94.7% | 74.3% |
| 3caxA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.32e-01 | 85.3% | 68.8% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.51 | 45.0 | 3.88e-01 | 100.0% | 65.3% |
| 6nhsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 39.0 | 2.85e-01 | 85.3% | 87.4% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.51 | 42.0 | 3.20e-01 | 97.3% | 71.9% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.51 | 38.0 | 2.83e-01 | 81.3% | 34.3% |
| 3by8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 3.43e-01 | 89.3% | 87.2% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 38.0 | 3.80e-01 | 85.3% | 98.8% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 42.0 | 3.27e-01 | 100.0% | 82.5% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 2.86e-01 | 90.7% | 33.1% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4413612 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 56.0 | 4.76e-01 | 98.7% | 52.5% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.71 | 50.0 | 4.89e-01 | 97.3% | 68.8% |
| 4277614 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.71 | 54.0 | 4.71e-01 | 97.3% | 55.5% |
| 3587356 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.69 | 51.0 | 4.82e-01 | 100.0% | 65.6% |
| 5053532 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.68 | 52.0 | 4.11e-01 | 84.0% | 63.0% |
| 4043605 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.68 | 51.0 | 4.97e-01 | 100.0% | 71.8% |
| 4373827 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.68 | 51.0 | 4.85e-01 | 100.0% | 68.2% |
| 4960078 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.67 | 52.0 | 3.60e-01 | 85.3% | 39.2% |
| 5006311 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.67 | 50.0 | 4.27e-01 | 81.3% | 79.2% |
| 3985160 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 52.0 | 4.50e-01 | 84.0% | 83.5% |
| 4044550 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.66 | 49.0 | 4.83e-01 | 100.0% | 73.8% |
| 3223498 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.66 | 50.0 | 4.18e-01 | 81.3% | 76.2% |
| 4959104 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.66 | 51.0 | 4.49e-01 | 85.3% | 88.7% |
| 4964662 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.66 | 52.0 | 4.44e-01 | 84.0% | 79.2% |
| 4105022 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.66 | 49.0 | 4.67e-01 | 100.0% | 66.7% |
| 5083330 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.66 | 51.0 | 3.02e-01 | 85.3% | 16.6% |
| 3618860 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.66 | 49.0 | 4.07e-01 | 81.3% | 76.4% |
| 4394754 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.66 | 47.0 | 4.50e-01 | 100.0% | 63.3% |
| 4963170 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.66 | 48.0 | 4.52e-01 | 100.0% | 64.4% |
| 4963695 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 51.0 | 4.49e-01 | 85.3% | 76.4% |
| 3587109 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.65 | 48.0 | 4.52e-01 | 100.0% | 65.6% |
| 3270895 | 304.107.1.5 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BCS1_N | 0.65 | 55.0 | 4.91e-01 | 100.0% | 91.3% |
| 4964494 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.64 | 50.0 | 4.36e-01 | 84.0% | 84.3% |
| 5050353 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.64 | 49.0 | 4.16e-01 | 85.3% | 77.8% |
| 4980708 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 49.0 | 4.09e-01 | 85.3% | 74.3% |
| 4965020 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.64 | 49.0 | 4.08e-01 | 85.3% | 77.1% |
| 4959068 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.64 | 49.0 | 3.28e-01 | 84.0% | 36.2% |
| 3808055 | 244.1.1.29 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › AAA_assoc | 0.63 | 54.0 | 4.74e-01 | 100.0% | 89.2% |
| 5048057 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.63 | 49.0 | 4.25e-01 | 85.3% | 87.5% |
| 4948381 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.63 | 56.0 | 5.29e-01 | 100.0% | 87.8% |
| 4962837 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.63 | 49.0 | 4.35e-01 | 85.3% | 81.8% |
| 4541933 | 223.1.1.43 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CusS | 0.63 | 49.0 | 3.85e-01 | 85.3% | 68.8% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 52.0 | 4.97e-01 | 96.0% | 88.9% |
| 166133 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 48.0 | 4.32e-01 | 85.3% | 89.9% |
| 4959266 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 48.0 | 3.35e-01 | 85.3% | 38.1% |
| 5007802 | 331.4.1.36 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 | 0.62 | 53.0 | 5.27e-01 | 98.7% | 97.5% |
| 4996829 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 48.0 | 3.03e-01 | 85.3% | 23.5% |
| 5019574 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 48.0 | 4.18e-01 | 84.0% | 83.5% |
| 5048403 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.62 | 48.0 | 4.40e-01 | 85.3% | 95.0% |
| 5053323 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 51.0 | 4.39e-01 | 89.3% | 86.1% |
| 3018456 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.61 | 45.0 | 3.66e-01 | 81.3% | 63.7% |
| 4980660 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.61 | 47.0 | 4.21e-01 | 85.3% | 89.1% |
| 3291496 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.61 | 52.0 | 3.72e-01 | 100.0% | 90.8% |
| 4930499 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.61 | 46.0 | 3.31e-01 | 84.0% | 42.1% |
| 4976589 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.60 | 52.0 | 4.87e-01 | 98.7% | 82.1% |
| 4931451 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 46.0 | 4.17e-01 | 85.3% | 79.1% |
| None | — | 0.60 | 51.0 | 3.48e-01 | 100.0% | 35.6% | |
| 3924304 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.60 | 44.0 | 4.59e-01 | 97.3% | 90.8% |
| 3439826 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 52.0 | 4.22e-01 | 100.0% | 84.0% |
| 4045675 | 223.1.1.81 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_WalK | 0.60 | 47.0 | 3.41e-01 | 84.0% | 42.5% |
| 3772566 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.60 | 48.0 | 4.85e-01 | 100.0% | 89.3% |
| 3965912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 47.0 | 4.35e-01 | 85.3% | 83.2% |
| 4980709 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 45.0 | 4.10e-01 | 84.0% | 95.2% |
| 2141257 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.59 | 45.0 | 3.92e-01 | 85.3% | 82.4% |
| 4431434 | 223.1.1.43 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CusS | 0.59 | 47.0 | 3.66e-01 | 88.0% | 61.2% |
| 3606765 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 47.0 | 3.61e-01 | 90.7% | 93.7% |
| 4399650 | 223.1.1.59 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › ArlS_N | 0.58 | 46.0 | 3.50e-01 | 85.3% | 61.1% |
| 2121270 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.58 | 45.0 | 4.22e-01 | 85.3% | 82.1% |
| 3965983 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.58 | 45.0 | 3.20e-01 | 85.3% | 32.9% |
| 5037261 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 49.0 | 3.95e-01 | 97.3% | 70.3% |
| 4003604 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 4.09e-01 | 85.3% | 82.9% |
| 3935896 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 48.0 | 4.16e-01 | 97.3% | 66.2% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.58 | 45.0 | 3.04e-01 | 85.3% | 34.3% |
| 5082808 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.58 | 46.0 | 2.64e-01 | 92.0% | 22.6% |
| 5038083 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.57 | 48.0 | 4.14e-01 | 96.0% | 70.2% |
| 3288058 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.57 | 47.0 | 3.92e-01 | 96.0% | 84.1% |
| 4946218 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 43.0 | 3.97e-01 | 97.3% | 61.0% |
| 5001593 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 44.0 | 3.62e-01 | 84.0% | 67.9% |
| 3215999 | 5001.1.1.111 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw | 0.57 | 50.0 | 3.17e-01 | 98.7% | 82.3% |
| 4960403 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 47.0 | 4.47e-01 | 92.0% | 85.6% |
| 3808257 | 331.4.1.33 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CCB1 | 0.56 | 47.0 | 4.61e-01 | 98.7% | 92.9% |
| 3929255 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.56 | 47.0 | 3.81e-01 | 97.3% | 48.3% |
| 3962603 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 43.0 | 3.86e-01 | 85.3% | 78.2% |
| 3967508 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.56 | 43.0 | 3.81e-01 | 85.3% | 80.9% |
| 3480384 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 42.0 | 3.58e-01 | 82.7% | 50.0% |
| 3262446 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.55 | 45.0 | 4.32e-01 | 96.0% | 87.1% |
| 3889564 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.55 | 46.0 | 3.72e-01 | 97.3% | 96.9% |
| 2855513 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 42.0 | 2.84e-01 | 85.3% | 38.6% |
| 3841571 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.54 | 46.0 | 3.59e-01 | 98.7% | 86.1% |
| 3895141 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.54 | 42.0 | 3.60e-01 | 85.3% | 80.8% |
| 3586334 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 45.0 | 4.24e-01 | 94.7% | 76.7% |
| 3966544 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 40.0 | 3.17e-01 | 84.0% | 69.1% |
| 3820073 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 42.0 | 3.20e-01 | 85.3% | 88.5% |
| 3998298 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 41.0 | 3.02e-01 | 85.3% | 37.6% |
| 3565109 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.52 | 45.0 | 3.46e-01 | 100.0% | 91.4% |
| 2325680 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.52 | 39.0 | 2.70e-01 | 84.0% | 41.1% |
| 4643976 | 101.1.2.654 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA | 0.51 | 44.0 | 3.51e-01 | 100.0% | 57.6% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.51 | 42.0 | 3.24e-01 | 93.3% | 71.4% |
| 3601580 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 2.73e-01 | 89.3% | 29.6% |
| 4955365 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.51 | 38.0 | 3.27e-01 | 85.3% | 74.1% |
D2
medium
residues 95-152
D3
medium
residues 153-222
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 63.0 | 5.54e-01 | 100.0% | 84.5% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.69 | 62.0 | 5.48e-01 | 100.0% | 82.4% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.68 | 41.0 | 3.82e-01 | 74.3% | 47.3% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 56.0 | 4.77e-01 | 90.0% | 61.6% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 60.0 | 5.40e-01 | 100.0% | 82.7% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.67 | 60.0 | 4.99e-01 | 100.0% | 59.5% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.67 | 60.0 | 4.47e-01 | 100.0% | 43.1% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.65 | 42.0 | 4.33e-01 | 100.0% | 67.6% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.65 | 57.0 | 5.41e-01 | 100.0% | 92.9% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 56.0 | 4.74e-01 | 94.3% | 68.4% |
| 2cwoA01 | 1.20.58.1200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain | 0.64 | 56.0 | 5.51e-01 | 100.0% | 91.9% |
| 3a7mA01 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.64 | 56.0 | 4.84e-01 | 98.6% | 67.3% |
| 3o2tA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 56.0 | 3.69e-01 | 100.0% | 40.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 46.0 | 4.11e-01 | 78.6% | 81.4% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.63 | 54.0 | 4.64e-01 | 100.0% | 84.0% |
| 3n3dB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 49.0 | 3.23e-01 | 87.1% | 48.6% |
| 1fbwA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.63 | 52.0 | 3.24e-01 | 95.7% | 34.6% |
| 2j49A00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.63 | 49.0 | 3.99e-01 | 94.3% | 44.8% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 54.0 | 4.69e-01 | 95.7% | 64.2% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.62 | 55.0 | 4.82e-01 | 100.0% | 66.0% |
| 3ctwB00 | 1.10.8.930 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Protein of unknown function DUF1465 | 0.62 | 44.0 | 3.71e-01 | 75.7% | 93.3% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.62 | 49.0 | 4.40e-01 | 85.7% | 68.0% |
| 4hd1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 52.0 | 3.64e-01 | 100.0% | 38.8% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.62 | 54.0 | 4.56e-01 | 100.0% | 100.0% |
| 1hciA03 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 54.0 | 4.59e-01 | 100.0% | 82.5% |
| 1k0oB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 51.0 | 4.34e-01 | 98.6% | 95.1% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 51.0 | 5.04e-01 | 100.0% | 89.3% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 42.0 | 3.94e-01 | 74.3% | 71.3% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 44.0 | 4.03e-01 | 80.0% | 88.5% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 43.0 | 4.03e-01 | 100.0% | 60.4% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 44.0 | 4.14e-01 | 77.1% | 96.3% |
| 1dtoA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.59 | 51.0 | 4.53e-01 | 97.1% | 71.6% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.58 | 34.0 | 3.37e-01 | 77.1% | 51.3% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 42.0 | 3.30e-01 | 77.1% | 57.0% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.57 | 50.0 | 4.55e-01 | 98.6% | 77.1% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 48.0 | 4.51e-01 | 98.6% | 77.5% |
| 2gupA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 46.0 | 3.40e-01 | 97.1% | 41.9% |
| 3um7A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 38.0 | 3.42e-01 | 100.0% | 55.3% |
| 1wncB00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 37.0 | 3.63e-01 | 81.4% | 91.4% |
| 4nn5A00 | 1.20.1250.90 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Thymic stromal lymphopoietin | 0.50 | 41.0 | 3.60e-01 | 91.4% | 67.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3927006 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.70 | 63.0 | 5.78e-01 | 100.0% | 93.3% |
| 3937918 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.68 | 60.0 | 4.89e-01 | 98.6% | 56.2% |
| 3786136 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.68 | 59.0 | 5.05e-01 | 98.6% | 73.9% |
| 3495901 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.68 | 60.0 | 4.86e-01 | 98.6% | 56.9% |
| 3632454 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.68 | 59.0 | 5.56e-01 | 95.7% | 87.1% |
| 3609215 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 59.0 | 5.73e-01 | 100.0% | 91.3% |
| 3585081 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.67 | 58.0 | 4.78e-01 | 98.6% | 58.5% |
| 4975245 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 58.0 | 5.46e-01 | 100.0% | 84.1% |
| 3932298 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.66 | 58.0 | 4.41e-01 | 98.6% | 46.1% |
| 3225714 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.66 | 58.0 | 4.48e-01 | 98.6% | 47.1% |
| 3786750 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.66 | 58.0 | 5.12e-01 | 100.0% | 74.0% |
| 2857735 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.66 | 58.0 | 5.26e-01 | 100.0% | 76.3% |
| 3498656 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 58.0 | 5.37e-01 | 100.0% | 92.2% |
| 4957466 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.66 | 58.0 | 3.78e-01 | 100.0% | 46.7% |
| 3179881 | 109.4.1.349 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIX1 | 0.65 | 56.0 | 3.87e-01 | 95.7% | 36.2% |
| 3815026 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.65 | 57.0 | 5.41e-01 | 100.0% | 90.6% |
| 3201430 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 57.0 | 4.97e-01 | 100.0% | 86.4% |
| 3489654 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 57.0 | 3.54e-01 | 98.6% | 26.1% |
| 3028309 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.65 | 58.0 | 5.39e-01 | 100.0% | 86.4% |
| 5057844 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.65 | 54.0 | 4.49e-01 | 92.9% | 76.0% |
| 4613593 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.64 | 56.0 | 4.32e-01 | 98.6% | 46.9% |
| 3669330 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.64 | 55.0 | 5.26e-01 | 100.0% | 88.2% |
| 3402376 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.63 | 56.0 | 4.48e-01 | 100.0% | 53.6% |
| 5054405 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.63 | 47.0 | 4.20e-01 | 97.1% | 56.0% |
| 3880101 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 54.0 | 4.62e-01 | 98.6% | 67.8% |
| 3285752 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 50.0 | 3.97e-01 | 100.0% | 42.0% |
| 5000469 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 55.0 | 5.09e-01 | 98.6% | 80.0% |
| 1268318 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.61 | 53.0 | 4.52e-01 | 100.0% | 83.1% |
| 3598050 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.61 | 44.0 | 4.31e-01 | 80.0% | 80.0% |
| 3393542 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.60 | 52.0 | 4.06e-01 | 98.6% | 82.6% |
| 146673 | 3017.1.1.1 ↗ | alpha bundles › Alpha-helical subdomain in E2 regularoty transactivation domain › Alpha-helical subdomain in E2 regularoty transactivation domain › Alpha-helical subdomain in E2 regularoty transactivation domain › PPV_E2_N | 0.59 | 51.0 | 4.58e-01 | 97.1% | 75.3% |
| 3367387 | 604.5.1.7 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ALMT | 0.59 | 51.0 | 4.58e-01 | 100.0% | 89.0% |
| 3259417 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 49.0 | 3.64e-01 | 98.6% | 43.0% |
| 3572533 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 49.0 | 3.37e-01 | 100.0% | 31.3% |
| 4322883 | 601.13.1.11 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS › FlaF | 0.58 | 49.0 | 4.33e-01 | 92.9% | 81.0% |
| 4942757 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.57 | 46.0 | 3.99e-01 | 100.0% | 57.1% |
| 2846829 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 36.0 | 3.34e-01 | 98.6% | 49.5% |
| 3961309 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.56 | 44.0 | 3.64e-01 | 84.3% | 56.0% |
| 3254789 | 3939.1.1.337 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › Bap31 | 0.53 | 47.0 | 3.48e-01 | 100.0% | 60.5% |
| 3965610 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.52 | 37.0 | 3.52e-01 | 77.1% | 65.9% |
| 4992925 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.50 | 41.0 | 3.14e-01 | 97.1% | 72.6% |
D4
medium
residues 269-352
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.79 | 71.0 | 4.77e-01 | 100.0% | 37.9% |
| 3utmA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 67.0 | 5.81e-01 | 100.0% | 75.6% |
| 4cemA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 64.0 | 4.39e-01 | 100.0% | 34.5% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.65 | 46.0 | 4.16e-01 | 75.0% | 81.4% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.63 | 47.0 | 3.61e-01 | 78.6% | 87.7% |
| 3pfdA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.63 | 45.0 | 4.18e-01 | 77.4% | 83.0% |
| 3pasA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 53.0 | 4.10e-01 | 94.0% | 76.8% |
| 1rx0C01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.62 | 45.0 | 3.99e-01 | 76.2% | 75.6% |
| 5af7A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.61 | 43.0 | 4.02e-01 | 75.0% | 85.5% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 42.0 | 3.86e-01 | 76.2% | 78.6% |
| 1udyA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 40.0 | 3.62e-01 | 70.2% | 73.3% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.59 | 49.0 | 4.44e-01 | 94.0% | 67.0% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 40.0 | 4.06e-01 | 71.4% | 96.4% |
| 2dc0A00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.58 | 50.0 | 3.24e-01 | 100.0% | 84.1% |
| 7yugA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.57 | 41.0 | 3.72e-01 | 75.0% | 96.5% |
| 2uxwA02 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 41.0 | 3.75e-01 | 78.6% | 81.0% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 40.0 | 3.88e-01 | 77.4% | 85.0% |
| 5kwaA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.59e-01 | 88.1% | 97.0% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.55 | 37.0 | 3.87e-01 | 70.2% | 93.6% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 37.0 | 3.36e-01 | 70.2% | 75.6% |
| 7powA01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.54 | 48.0 | 3.68e-01 | 100.0% | 66.2% |
| 2e9xB02 | 1.20.58.1020 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 44.0 | 4.10e-01 | 92.9% | 89.9% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 34.0 | 2.94e-01 | 84.5% | 40.9% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 35.0 | 2.92e-01 | 71.4% | 81.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3690958 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.77 | 69.0 | 5.21e-01 | 98.8% | 43.6% |
| 3846151 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.73 | 64.0 | 4.26e-01 | 100.0% | 29.9% |
| 3252762 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.71 | 63.0 | 5.31e-01 | 100.0% | 70.3% |
| 3563048 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.70 | 61.0 | 3.68e-01 | 100.0% | 17.8% |
| 3247851 | 109.3.1.33 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 | 0.70 | 62.0 | 5.05e-01 | 100.0% | 66.3% |
| 3648891 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 58.0 | 4.65e-01 | 96.4% | 50.6% |
| 4029794 | 109.4.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N | 0.69 | 61.0 | 4.21e-01 | 100.0% | 40.3% |
| 1392345 | 4995.1.1.2 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › AppA_4HB | 0.68 | 46.0 | 4.36e-01 | 70.2% | 77.0% |
| 3327180 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 57.0 | 4.91e-01 | 100.0% | 65.7% |
| 5018203 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.63 | 51.0 | 3.88e-01 | 89.3% | 44.8% |
| 3481965 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.62 | 48.0 | 3.91e-01 | 85.7% | 79.4% |
| 4962252 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.62 | 47.0 | 3.58e-01 | 81.0% | 45.0% |
| 2889550 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.62 | 42.0 | 4.21e-01 | 70.2% | 95.2% |
| 3695311 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.61 | 52.0 | 3.90e-01 | 100.0% | 57.4% |
| 53450 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.58 | 41.0 | 3.70e-01 | 75.0% | 77.5% |
| 3505448 | 106.1.1.10 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › BCD_RFX | 0.55 | 39.0 | 3.30e-01 | 75.0% | 67.3% |
| 3916150 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.51 | 39.0 | 3.93e-01 | 84.5% | 81.2% |